Tutorials
Xenium Explorer Inputs
List of Xenium Explorer-compatible input files.
Navigate Xenium Explorer
Learn about Xenium Explorer and orient yourself to its interface and features.
Image Layer
Learn how to interact with image data.
Cells Layer
Learn how to interact with cell data.
Transcripts Layer
Learn how to interact with transcript data.
Check Data Quality
Find tips for examining cell segmentation, cell cluster assignment, and gene expression with Xenium Explorer.
Export Regions of Interest
Use Xenium Explorer lasso tools to narrow your focus to the cells that matter.
Save and Share
Save UI settings, transfer configurations to another window, and share settings with others.
Image Alignment
Align post-Xenium images or import images aligned with third-party tools.
Converting Images
Convert post-Xenium images to a format compatible with Xenium Explorer.