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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=QeZNdZig8ax5wTJpWbetFcu~QF3yfyusA68lzDqqT7IsAboJZEjO5bigS1ppBclBZOUUiVee4vhtRptF5hHr6NH2n38bZO7spUzUyDu1NB-mJrvCeNOBIieKRXArAny3NZbYbEfvCaWeVc0Ix-dXhcbJc2AJDBkXsaUfYCUsvjxZqR~CEcMvPUIr9BbcB8zxOjU9D56bKS33t7-bMvjTebGZEu9SeGUwAqnd8u2~q~4tVK9rf0U4iyWrigy3Dc-ayWXQOt2LES2pE9z2a0jTmq7sCxWM20WSZuSsV0vPjbSmaFnlo2ibNQqA68Sqhcc7dmQc6ZFt842sFXa~Jkdn~w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=O1ntLN~aMMo18WlKQWNo7Og8Ms2Qd~nMzMUpzCfOREbA1uAKURIYiOZ5MJk9cpdlE5U2J6tGs1JYnvnEOm1-PNzJkUJu~oCuIXl23F5KIoqiCNMnhrIBx3e4jtmVMonlfQDr2loVvCG9us~fccl9xA37UdJ~5qeIIFzFslxtp-rPKaiHGlydxZGTWNu1M7wTuNN-jHKZIEvBsUAY~0fUs~tiaF948JoH01zsNwNQBSFhnSPA2PwIxIZoJDnLzqEE1Ss-iUjiSdSh~IeoVgHwK3rnJk4ilzXqxZqNghO5EFqag3dZexQI4JUaRY4xwGUiE~dghGCDH8ouY8-2um8duQ__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=L3z2cSPXQ7C4FKdmgYfi3d70p5Q2L6GmkuyHNR5tQXVKwby5mdRHbUi~mfh2wE-aafDBluaXRnzmbrpEi~DmGwgDkid2NXOjptM3xvGZYBeeby0wco1Z~cMeyHBl5kl21f~wfUcxgDc-EigYyOYiZPWB5BHfB5ywezWXY3RcrMfjWOBFegmjHfbtZRF35HscYC7PrkaQ20v6u8Io9eeQ70lWGBAIV6O~ZkZY-dZvnA-A9LsB7QoeoPqjbd5jbv~fAuu4bPJ4qBB0WUk7FojBBPjtygq09h3VYIIg6msqEEe8Z7mCMzBz0Hdyuwe4YQn3OqBqBNR01HYNNStvbS-YNA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YoIF3sArZwLSeRsXsIbYP2D9jcDwcEHvUDP~K0zVXqlqV8sUnIbtnEpvBfEd2gFXNrb634d6IY4tZEgpgnKqoEvae2BotmaupGBNQ5xLA-SiTFwsHKc8fbRmFgNHQXTzr4H~k6H1H0~3IH-QaBiMTFWzt28N3Ww~O~nd0qjd2iTPXZ8Y1Ia3W9WSCkhmrysLxddcbfPTtoKGA7THDhkdf1oZt9y0Q8ma82nQfutw6qxGn37r0X1STWQ89hxXu4a8QMXFHn-28SS4sf6RuIfOW~yw1k14z7zcr53DvW1xAVQBNH9SV-ZxhJ2T72mbqR2yn1Tzz-T-oPWQ2uNFcZ2Fhg__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=TRgRnd107SW4cUUY79cDsNwX3CMlKkh1NTA1NQYASWG4rdR96XRtElOxFyrQvjCffKfJUGu53wo8oCoVCPpZ4fZtSyQyZM43L64QQgo8-FASTEw~J44bDQMLbnp7LTQcIJDzFmpYVcwvOfgZSFQUy8DZ4Vhn4EtTG1-n4XUCalM821304TAGr4iXAcVrcL-dRDnSIuodn-fpHZrvEfU3Cc8tiKLJy-PB3SoLhchIwbLOWP1AkIriy12f09gZV-PbK3LvcVWElDWtQL108BVNC6Ajt50mgrN-C0ovx84IAn62kEvPYd1ItvI-F9IpTHnYkxge6GgrUZtr5Mc5WzBGXQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=mmtSFJ9InxIDejajl3RTzM31EkaAUOAzO27EN-uMpgn1iecewyfE7nk-toMTGnMmTuTjMKoMqmzPXp0Q4cWvgYu0txeoDhbOJFGR83NHIzuXFIuRnhVffwio10MlVmkVAFPhGywobnW6J1LTDHgnuLDY7xgmZYKKsxWRYT2PvVuwx0pqZmPm9z2u9uZ9zx90EJfiIbIt6xtL6JDW83PSrzrOB3ddwjO3g1xjeNSSaQjAOL-S6p9rEYByceC3gf8CNQcJAPdJc6YQ6Y-nG94GbA-LWIFFRQo3b1UjeiFN2t5mO5FKsmLESvG0mBnEYB-GmpWYYQqV2MgHJvD9dWClBg__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eUiAK3bohmUETD69OR2wgEK3FVrm69R~NqdI6j1tMRXmXKWU9~0aoBsIOaa5Bkd95Mi4DrWCjLR4IPbYIFPPiFrRpRJj4~m11kBAiOxc17HfFrx3XleAXw0fcJmSMfzBBfNTqCW~gY6Up7aW5uM0e2G~TbtDkuc2vcFS~j4CiRJuhpRoAI3xnWgiVPda2f5AmTKPurnzbxnLep73CvX6G80UU5a2cyVESlaD1ePFPvRvmmJQ2iI5rUS3rW~41ctEgJwL~IPnNlmV5xO5uKuU2IopIt8vLS6Tfkz88bbBxE88uH8KEqfuSUornN2YcbU-H5ur0ZPgpEwArLC~vlIbAw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1751914507&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=hPardNbyPqsm-QWZdJRoHafrgUbpE~aBzH58rSNW8Rm3Rv0Hf6wGBNbjSi9WyVhKVFhbnTUJSRIVbYC869q7FEN8Hh78bVCJuSvaHD5cb3HB9FlhOwTdvC5vZfWgd0ivKaDfOqHmIMNPQU9rvbljpbVYE3-3~aaKJTAg2T52SAtLTyPodh6UIAyQBQUlWE8mT~zN6lWfihweH09W5-QOXc1oQ1S23C9kb7UZeTBG9xcEOIwPjVQtZHeFUwc2DTH9G1lxz8YuNXoCz3-lTVaU7f9lGoErdoQMQQylTwH2SqJThaUUwJ0ryOiTZDENLyFwzG2bqyPmbFwwrUCQSpJCIQ__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes