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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=b-HsXHr-Ly2jO4hVUus4OCcooC2Dyvgv8zGLKM3hSeam6tDMePnCP4gLzGtnqP-7JD39EEF-WK1FP8MiymVYaX5CFVXzPtvR5pbKYX-S95GTVPRtQ-Iwo3n3Tzt29DD0Q-UdCP6B2S5lQvZ4~yWe81aPmo0FRFtuH30K-IIkysYJcmz4Wmp9eNEb7fbcY1iIoat-o7zeaQThlGYXSd2UE7OQu31kzL1MAlAWUL1OY8XObk5NakYFDjyfaY9vEK4~0M8b2cG~Tp7ft7Ke8MsfgtU2JvpsokTKzLB652cKH6dt5nPl7RJos0RuLT6~WxDuC85W~Dqi3nFfDYDiY5lFAw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=OzdIVcybttryqDH-XY7KnY5QB7p7nfxlxliYv458OpMwGzoYrMfgW96Io98las~lxrCvsi-lhvsPDxVdwtfg6fcVWHEvY4usvj79WvkY7dF3z8EYi86-UAe3ZAUAGqml7GNwISagS5vViW-CJhRvMCqlPWnFT4PqbFD7kNvmX8w4Tibbdzh0GUHuJuwnQEnSRROAQj5EJnTLeZ6xB9sY5KP9ab0TVO94zH9fy-~6HSS4MJOVMdV8oD2kGgljF7KQiR8MtIHuh8rSKWvpC4QMZcmFxcVST2vaunK2thx2lZA-O1i0DmnF7IA6Vs944hwD88YUBP2h38S51h-horo86A__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KfKf9SYz8OAhXdeujjvn9ySjQprOtVC4NRmWFnd-3QY7vXqZsMfaY3cOmNMk24JO2FAH5yeCxZTnaKNdaMB-5mQBXDSBGlQn3HqtcJqwUXV7Yo872SnzyzqcXFCbabr2VlSz1fumZIOkIqfgJPjFLI3DJzUUD7R4IXXRTgY-xLkBUtrEk7ujrv3E1NBXI4SC3tK4mpKDJ2DEeb5fvr6FYK-jkb1DhUILPCd2DL2j0gkBDpgSKPCck105ootEYNN~eLZ6f7DdmP94FwW~Oz5UWkK4pkRiaf2Q58BKq3f8-BGopyyegD8hst4ScTNhz22DM9uGmn5NTja21eIAoPU0fQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=JgYqEZlK4NOYujkA1MUbwxCp8nH1qGFGY8o~Sb3TxSvzz97nhzgeYL1gbzsAZm~yPawI8Mky8xIX8n6donOlHkEbavbu5l2jTaQ1TIHgOu1QSWSjmouq4n0q8wi3hK4-jiSibyYNSVNMhOhwDxgHKBe~CF~X3E53jSchxET6GMMkqN6Oocni94rE7lcJc2hr8bTK-9cB~uX6hIqD5KE8ysb-gYRExrIL9x4aBDkagQZ9Sh2Wf6n2orHQwGONs8xB3cBhHKRQcTM0ZebKdmvzjRsOa93i6KcAaAMaxgYaId5nxk1C5ezKJV1o0Kz19UMHqLsRApuDgrG5GS1PiDITBw__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=MyiIv6Jlmj2fAQhKePfizbq96BUxqxfhSj1oxxRZrdPdqdnrPBTNCMY7~Et1yNFUoaR24R1aQnbemyXKEYE1O0K~AZooQA5nkUK7x7zxxhRyJf-tkGrVgSGtE5xW~7FqdyaxmTnc-XvkJNJuXJRCMCGHyzXSai8QZQn6~dSMutvwxrx5aNZgsUH4dYmRuLlpC5kY0VkMgHces2QLxrP3GoK~f5MSFzsOTAIozEEgFQ7U-XGK2ZtkVmKLUt0Mqi-Itw4NYBrKeQOCsXusUz3h~uCeYumuBhW-767sDKr8dQoHkveh6JSBr1rj2O1qImvuVFq4FJJ6EueuN46bc9PDIQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=GkF~LXE6LC4DSj8R-aquiCdm-DpEFdSPqSUyo7X8xz5LDfaqUckdf9h4dsOWMTmq3fXGKRYj3cM5czF-2-5i2inx-m8tOYWgZZlhHnhs~53vIt053sxwG5cZSWuwZ~nkxVCRbWioM~QOdCs6JjxXaahHnf5B8nSbqP~08yUSOGEddlo9QeS6xkHNGZnFmAHWpr0qOUL25gzwwfR8B4s7uPGFJZ8PlMjrnaWQvEhwuhfO9vu7VJFofvTuHSxonQjw45aAMt3tr4TEeOTTH9aLVUCZXxUj7ZZm6CRyDL67XDK-Pr5KfNPw5U951f4coRgh-~eRs9WTxE62o3~c1YRUnw__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=cxWO~JDYRVjeZSfELBfFt3Jzg~159r37btnw166Z22lT4GEWfjnSDm5c7CrznHwcQDwQ1GF8hiSdoVks3MUipWM~60wPs1qh2wmDYdfRyunL-FlVX2D1bRT9ImC~oEKadv9lsmeyiJghQgDQgUnJI48Oqd7d~ZOiAyhDLSIBnAjpJfE7m0~AOiPfn1I4NDhSga7U2RBQLW4hvs8a9DOuOLZjtm3fW~yT~frvjd-qbPTwRhXh6y0xnyZCcvMctrXbkBLJSacj65RFzIpO3mD3OrMys6~Zy2zHb9qOoYnWfkzXDsDLEZVitm2EyNKYYy5F5bS782xp7UqGmQILVG~NzQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1740257107&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=W4rgN2nH3ZKENaQu3nMaZ88Om5rrFgXdPoyTv0iqEEj~~H1wqRrIs51AHFptc8F6bBEQIGHzyuVmZ8gR2gBqyKN5KPxHVEA8Gdlv-8seQWxMeCQ2hQFiF~wnjCu23m8UnWCzUCTjiO7rVZI0lvicKEPcTG~tOgEuhI~MwnBY96Rjv9VYQmXxvQDe-DJTcUKG9kFgoFRAt3FzEB~x8wbkDHIZSHDAaG2kFHEG0QpHPZNrRB424EVS0FkkxpeuFkDOM1HY1fZMDFdJCxlgDZi8Zq3tTvY7Y9IHbFRGTrUqHsa8Sk4FGGSwY4XkgCWd1QlfqnmMOSL-UODAzXGuNDMwsQ__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes