Support homeXenium RangerDownload and Installation
Previous Versions

Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LiHOGR6uW8LeiFMV53sc6QUEmHkX5c13Lj9rMeNsS44~UQLa2zpUEhyiI-ACcmHdv-p35b1Ixi5ZxVZst3MdmpiuyImZrvukM1haVJSukPp4jPOrKqGW4~vSmybjmxeOFxLYeMVI0mmqEuA6bjMp1GWK~hYPxrDaVHsH8RiG913A-1ovAYaVZ6xqIIVufAePjDJG0BJiOzO5~iyOvKP3V1yIqRykQPDKidZITLmoPaCxhfxvju1zJV0oNeTrLQHmug2NgitAoNySjdoeTBaATcL0m2WX3e8WzMOeRViapMeLJ69C7WLscgD0wn-zA26c4RZuZWaHxl8~n0VF1MTxUw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PLUUTLUzjxzHCfm1op5fAwEHSdJhusqvU0d0Y4Sc3WRN1bAglfTg-UjZNIjvirh9~4tDHql0MhNirmHWoeg8jvApfe5DRLPl~fnIZA3G3LZbyM7OE7hWjOf9i4dz-exQ1BdLRYhHID3PptpBlSyW04d706kFOB1YVNOx7ISeMpM0AkjCMVnBT5MDkUfjMNajDWInHApGkcZfZrLhRsq7~Bm6a4z0dq-V7ggK5dEczMh5G2rtPxgIaohCgChOVmh~SrP4rI63ivys7mYdi~A4~GiNo1x1iy86xutwYvOS4PFroTTPtnZScEtFYm1RHDQxkSkIz9yJ259vEc05Zm7GvA__"

Download is unavailable on mobile devices.

Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=F92Dl4iIMUN2lVtQu63xqakTA5MRbY5fJQ336Od99BHtwQ8Wc-a06AdgHZUC94M5T3K6uRvwJ~KWNObp5EIrRVwRaQIIg3xv5X3xkAG3jWi7t5qysfpRBY8cUBFHFNe4VmjGV3sN5SfktMHh0mBeLofz1vsjfVEMMn7gMz6vbkg0GzesfcV7LGSyKx7Ep8-uP4kwGlfBNOwKpsPc8wucrYd0V6aBVn4D6Ny6ermP500MHdmOtYcMXzpoBgJiH3WtrnLGV5tjtJQsHAhmlxb7VlqEvowi8~OnBG1Hfc66uw65MYFyx8MiglIFbZjV3kA73aeNNzXzu5n7PAyeHa1iTQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=na-vkfp1w8ymqln85vJ0P~-S~zthzvoTSzxB2PftljzyE6QgJghRhNyyDZtUY2Vd-M~qrP5A1mP1jjySGNOW6e5XB~UJZFUT3sPKLF2Gl0w4S3rTEUS5Z6CsZlDMck7MJ8SinR7pODL~XXbW5pqbjTQbx6ZSikqGPy4z1ZA5bA-w6BvcIUYHfzmbJN4nKyfcy3Veph~c5NdNXNsoberxid79gnCdHLhuncOGn7S2vMvOsVDBe0IcLiVEU-FXBfkj3sSCJAMfw2F68E68APLhKN3tzwCK50Ko7GjCKyYBXBKzqyN4cVEfNXTvvdS~M--uB9WX7hmeVEsHkVY827CTCQ__"

Download is unavailable on mobile devices.

Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LRJE93WlbgRYl5nKOT0poN1MLnu9gWZYg~spCeNwr5FOx8St3Hl38DQuJt3y9RA0AYmTUkXmxcA7-lgtX4wj0Q6pQmqM57Bj8aOf0V236I1ib374kxtyo2GlPlzxbSc1GZu9cNYhNlLpihvKE1BaAax0uHlLx0kA26qHLxP~PWTVtotCOio2wI1c-hKcvzgTt3mWgxeAfCCF11ofkR0sGar-ZDtje0RIY5oLOpr9qZX7QnwZ71skEras11bSXTL5u4B34Qvih3pB8GLjjDUC58C12sqclzhASwcqMR~ySJPBKr4tk-x8TxZHYUhH5n-1K942qSP7c~M0i9IZLvxoOQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=FR0m9ZAYx8rq6R3V5crGqID5bsylPanP3D2GBWYqbM-m~QkU-METpYp9fXqkSrbcMkDdifhDd40otmhBUmXJOitQw5h25fuPGBqAABukkUyd1rEA33m8VG9lRDwSqrBVNW2m-5kMUW3D6AoE4BOXcPcP5jc~g4F4B4-jF8IQhl0gUff9sl-aNBD7y51evc7Au91DvU5oKMl4tPCqux6PNjiI3lnDmcT5xMETVgx1ESVNVDd71XnVH681-ixqX9N2n79SXUtC6N5cYQTXOAXKuBkbMHW-Y5NiNEnw78s5-DAzsMN40n--cDycZmW8ox9x12WEtdrsp3fDvKDHxQ5uSw__"

Download is unavailable on mobile devices.

Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ZihETzZgpr51THfcdCP5KNed3kssp-Z7ThzaFq~2epuzgCV5JLMwdXv4-2epnfQ0yK0q1PxOT9OrmRACeH8tedgAwKipwAY-5umDlwiFzfV59ZNIgwLZvqblncbk29qWjXJBwTXIA75WMEPt0VLj1eok2mLPjvsaxc7QPJHj0mjecH40CgMMYEWRRcUgOp6Gf6T~ffg8mzE6pCupAqScRdWe4gMlhd0HOzT1hxQgEzLIQ2mVKrB3oX~t678DPJqRBrLeclvHQeDjWoutbxishsHiNb9-yfhQunq1dnh-Ox0CSyNxGlynvp6UZvSRDD~fZqsUyubExzoLSghl2Bmvvg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1743836434&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LiG5JCiuZYd88oegT6uEoaQaEvb0uIbEjvCzC2kVgMbvtTW3sVzCTAvlhC6gPN~aH~KCiVukp53oj8lzOLQytchjl0rcw4mRXM1c1I6PfGpeGXDjneqlfGR3O92dITHv2wMk15dm7FoEZ-Tkskg4dpXszlZvFxxWDuNMv-116QV6cri-AG6XMQpmXTg4jlsTXlU3gC8unJkww8MkAAAIeVLUWXO-pmU8IL~a4TAd1Ycu8AOZkrgp12uzfp44x44WLvUNE-NsNrg16NU2RNRNGihtlpIEFmS9hGjbbONpiJWTBbY-pQd1xJmhY8M5SZxGLH7mhxbh53IoqfVHOS~Cag__"

Download is unavailable on mobile devices.

Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes