Previous Versions
Xenium Ranger 3.0.0 (Sep 4, 2024)
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Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kXbs4m5hT9Ap1KikSlDQzgK0TUoh~PmtKVxXjE7lH9ak2KbRPoDd9O5TlkfuyLlvURNzr5x8GM87EQpNjn5OU69eupOayaIA6H4tXlJGpAtp-EZe4gYZxCY-7W4hFvNszAku67HUhSIN8YxJNM03A1AAFeAYMH87AnoLWfhYpAYGtQIcJrvIy0I-PLQm0KU0qQV2lJNCwqdzfntApwG7HD5BQJGiIov8BBsVy8XUpLwkHVnm9H94OzPPLJVbEBQxG5oE7bB4oN0f9ahZ-3xbYMsK54dqgVIr3rv5Mvn64ORM9JOL~WSmP0c6K8IIpT8HM0MfSSvZbAdtBSwc1VvOXw__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DGHkl0gsLWqjCRJI4HxermwUnHyDEwzV7TaaixSHmSb~WGYHRJE5r-l4iWToEbbqqNGcLCAtcZcm2rKblaPXCCcROIhPHiGN8JmS9pbPZfS3rgV~Ss6IDeQA-CXA9gd~gi8ScJ~UKAvnJbsPQDdwwZE3tNGsM2CJpgmAib2ykahWBjWdE3hXR4y7kVeOEnQco07wnO1dxaHPklnV60FWvNwF8l4W3K8UVUNf8bc2XAd-hW23kmcbuAJVeiwOPn0dogykZ0U74YjAtufITK-KaJZSDFVwPcWZJEUa23UUnkg~4oOqWfvoOID9bXXqkOGPSo6Ik6fz5AKxbJ8TUlrTqg__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
Xenium Ranger 2.0.1 (Jun 10, 2024)
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Download for Linux 64-bit (tar.gz)File size: 2.7 GBmd5sum: 45d207dc432226dc003a31a287f5ec08curlwgetcurl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=b5FslCLMd8fCq-fT20fxtwuHHWW1BUd80LsEh-87EO3yk16it9wNnn8-Py6sp2dkMSJfy8fkj4EH6g53wcwLCu78aeyPlKfjQ0T3lyrOEn7HaLo~V3nqf5gxLPkfX27n4Gzw53YMNuNs8kHKO8i~vVhl28Zr9MLODBwphp4ltXXAquZVbrhQcnrNp9K7~d5g3B~EHMSpNtqCx6M9gbR0eUECOEBhAGbAEkZQdIE5OK0wk1S9ZZcxbBW~prv7ej-Nw9Ae~1ybIFh~CeWhDjiwV5p1zJ0CllaHFWgwyie5Xv~xgpTXO2G0idmxHG4bZVFl~9BCeeTnGdb3er9Chws4vQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.6 GBmd5sum: 244bdbb3d159ff557a7747c03ec487a7curlwgetcurl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YtQJ5TDQsBmVc2IqIHDe29ndbZ83g6vVUspnPUbEmBVosYRz8Ra5atO8pq6pEneo5FwO96FCJpPENQsyrUBPiStImdvu28F0hKVuBXAJ2mwW3ysrwRQFSNQFXuKkEsVKUqk9dhAx0a85EWZwTy9Xm73igEAtzyl4MrVc9TQ6kBJNhqzFGgDjrid-zNjjG5pxvSnPFOKQms1rJi69Vnbk62IDKKnNozqmp1YoBxvsZxSTUpFLM~ZzII9hNZ-SoAbGo2LMUJBWNLelzyCiOSzUeY9Izt16Uan7szIHSkgKUAW7hfeQbOzpBfERiVspb~PBtm4CDXojhYxLzMD7ZIu2cQ__"
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Xenium Ranger 2.0.1 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Default nuclear expansion distance is 5 µm.
- Enables reanalysis with multimodal cell segmentation algorithm.
- Interrupted runs can be resumed.
Xenium Ranger 1.7.1 (Jan 23, 2024)
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Download for Linux 64-bit (tar.gz)File size: 2.58 GBmd5sum: 51c373964e46c041e08ba73888657eddcurlwgetcurl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=W5750nZayP2dGI6EiOGhKIh8FqIgJWt-en8ub1D1zP6YDxKLTZbsdrNFqVhQkc7f-p6uVVDHCv8SSewblgCJrfkzQBuOuhhSEyEnqIgaquHUWCJObJcjCWbG4HBVyLNwQMoqVFyxQjU0geoj48AXGlKnxnGON7ru1-B1IkgOyaaoHUEn59befEkA8YmCVyB4chY~ZdkoSPKNw5fkcSK729wab3IpFyqex4xoeXTEksXEvzbGBkBrsavqODOZgttNtWbmRE2FodhN0Rd9xBjeOdaoOlt~Av74p3JkI06sS3PRAvvObt5GXJCNwtvsQ5LM4qW8jJqLu10A-dt-Iu7BMg__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.56 GBmd5sum: 43e6e4433303aae30973682dc5219f20curlwgetcurl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=fDGDxDdjjnAqFNbKQMbEYpd4G3xIogCi1KOqPoSEcxY6I118smwhYIqQEk1lbZYvMV706WMegEUcXIZIo8eQVI6VFXQx42hgzAn-TpTq8nVVtjtEPV9TQTijgu7BYFgyjy1pZeodrkAmQMMdExzrFE~t6gLhX9juwph4qXrbn7CoEMLH0L2xH54tEBdxWo~cDbNUAyZQgcFEVukVPbNQk52rYu1J~90nvkdeCSS8STXvTWDFI3THEm6VSMGDmyD7cgZQWgFyJehWoRFLU874jjs4h1NsobhcLwNyPn3YVjLQNYzPur4h6kGcAroWtZ2ZAS2lHAQOGFYH1o6C8Tb-pQ__"
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Xenium Ranger 1.7.1 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to latest version.
- Image-based import-segmentation now compatible with segmentation masks.
- Improved memory usage in the import-segmentation pipeline.
Xenium Ranger 1.6.0 (Aug 17, 2023)
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Download for Linux 64-bit (tar.gz)File size: 2.58 GBmd5sum: ebd970ceafc057668b9e664df310a5fbcurlwgetcurl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=IrRTFT~-pO4zz21B4FGYO8utPJ~CYWNXr9Rd-wqDx4guPRfwzgUBSXMhO4svzXwuVOcdQKiOAtja2GIHPiXfEGS8sqFDrYHT-~mt6xnizUP91NnfhDKTfVaBmf5~wXl0S3w7UIz6QUR6ZO6iaIcLL6hYBSAzIbUmXg3h5tkZ7TVXUgOvflrFiBaiXeqnkxbC6l4yjzBr2kHKGghSd5MXYwAAHB21IxWQRkLBYz7pohO9SpnnVN-kFkw~9xfgEKyRGIYYaZzvnuN-XlSCTtG83qrPz53QQXDekjIkYhhKNdXmszFhShwfbzE6LRJcSp5oqMWIcZ3IB0d667BZjlwHbQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.56 GBmd5sum: 6fa799cfeef91264fdc174ad43b6da3fcurlwgetcurl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1757882747&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Pq~p6LcycDm~IEaiwuguFy0zHDPpx9oCjHC~jxoW2LirKV6DKJ9TPgpS35VU~Yb-FvhLyWlFz5udw-1yLFxGny2Fu2e0inPqhHL9g7PJmlUgs5~bSgERTll2WxD7vMWvDm6Twzedm652qqPhwsIUpyc5VMUvcAvtpqOTYm90HXnEEv3vP1Ale5F2QMWPICPa402iFb9ssnZ~j~tfcDSA51B4eybbfIz3pjh~SOEmexacYNaz6ufKIejfyd0qr9u4y~8m45pBiO5e5mCyhk6xPYyRuSjUCCEhYeMIGAMwe8bFuBk1ltzbvMNNrC8wBOcy4g6TjQW33dXI-4pgoGfruA__"
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Xenium Ranger 1.6.0 highlights
- Initial release of Xenium Ranger!
- Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
- Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
- Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
- All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
- Backwards compatible with all previous Xenium Onboard Analysis versions.