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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ahf7NvJGEIOFCTRS-pjm5WQcxe3V6ces4BDStYU-AUeq3Kl8kRfISqX0C95bzZsRTJWQ8hf3r5LiwAmaXmvfBpYkDMXfyrAwRApn8rwlcYdC79GccJfnOlXRNEP4EfevCPTOYeNygygrLfFRkoCp4MEGWE5~DLs2iczDzI9aLn7jBImMSgYxB37cXTODrGPZOrAyfmQwNZ-i8UZngWbjg8EYLCo-aDuw4nywWrMI2SSaNg7AWHaJY8lXHydF1xJEPtNoAHB2rAnIn0eJj~skpJamXy6kSPRLpgEE8kr6m-2XctSYmQodiTFNmAOC5SeK6eq33m02IzlnuYu4muSlEg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=QP7UBV7T7PCxASlk6rX4KZ2K9sbibFxwPrFhcYckv8VqOIE0rTml~kLmxa56NOf-isniHWbglhLctih0~zzfk8vJM3o2G2L-KVkhpvXS4TRwtSBD1ijmPuJQGX29xPssN7T3QtZgTIG8XumsSzzGsA26UJUNgoWF0xcYkThbCXdsSADXl5DCoi4RtNzTZTa5euoYgkONh-8tMtBkTvbkJe5i4SQARylmHzDg00rRXJWG~ZU4Qode7bFimnvv-dadhiYlQ-vmjwPxdmVbD0sePeTEoNWLUaZ3OJMpcty57ka-Zu3qcIM-ohbvExktnK2apKnPcjuCXIPG~54osAImTg__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=k95SXebLF1-1OEdeSylvcgTc4wgRLSWNz5zm-dfXXw0HUFMzeV-Zojz0tIoSRFj1e1vV8KSFLSCILkMOm7YlAepMZqze607bN4lito9NW7LyYDT8I4uSE2YfbU-KjLjyDsiLG2Y9eRHdHH~AKNZGTCLppEsByXTB~LxzXzmIBvMQcA9AgIZhAJRmvzt~mKFTJkxlmk89J85jos0SVv2BjClfX7JZRWLZ396xwXFM8LNneSQbmmsuTELvmHETPocnyKbxk289Toyd~R~RLkgjCE0QMoov7w7R1r2o277a4xVor-xihZ9eI10clgJ-9BN-LvCtdP~~uS6F40v4trfIRg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DNpeeZs3~gmguO3E~VS0-j6-BrRc3rJvxwS2GfhDFrGnWD3gR6cGa8sSnJCpvYHkgea2~cJ1SuVgfOoCd3kqIrWu~fU6MF1pTKW1jzM57Nh9IuibafpujvTTMR66SgSfRDkj837aG7cyGYIrrH7ym5vG1jv-VhC4twRSr5ub7Xb41q34QyziAYMvsyRGgrLYBzCAvLYVfIeNd9R1jLdhuF50JyFngdxaBL3t-KO0GHSbWV4HH5eXmveRD8d8B99Lu0xVgsmclPSV3wRDlE6OEPDTL8gLVibpgFWbVaCZy8AqQ9zx1Pm5PX1AmPwUTlLpsjyI4RDh~UR~54sureyMzg__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Zb7wVoTfer4osLSDhjtFapmUNJWgHSn3QBe2jZBHeI66H3KPN2srzTN-0uOUk8aAitO0NJ~tyW-Zpp3NqgAv33qVKjPYPXThb1iRl4nPgeFEe~xVGOBGctOQqqlk7LLhKhNWnay05uTJCN6AkaHXJumLPqI3NJ9PXUl4dhVrpwwf~Xs-RLu9n6pK70n3vnrpkjGIEUxWG4H~Kk5Fk25DtuGsJ1Atr-0bbu3aFGSppQ2pnowkwCn2qvM3i3~L1~cYY5v3y4LdhRL-lnNwmbwxQ6avuzUneAs9-L97UroCRWKXBUZJ8hDU1OFwjAkXmTzSqCZIV-yDSHcpMZwwNniV9w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LXQLWn4tlRxgbrsxOmSEV~1FWk7JqHPTEvS7pZ2kWxiV-KxcWCjQal4J4ZSXQTy-EXgaL~UY1Rbxj8jL1yg0GS-9aiHpWHm0qCTsDkPISPThmG~dIappyAk5ZJVbIZGXHgOHpBBCE24neuUbnKv6s2O-BQuiNPjpSxG3epOvFuQ0Mv4xgR6WJQoqPZI8JYRaAZoXevmxTac8xrLD44fS6pWySLhWDWP4RaZBqEn~nU3cAdaylbpwwXKMf5LJlgrAjjmijn8frmnPEHvKwfCGSCgZBRqPSlt1eLr3tNln60KgiOKjV4by1akpgneXxBS851juf8XxdksNOHX7-bC5cQ__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=T-oHbTUD4zk1W5hBj2P0no8T~svUN3oWe69ymhkTNvBcerdXp1lUYWGOfZbfPVJqU15WEyysMi3alJyEzKC4cXnOJtU0Rtp~PcmZtkea5EirXenL28c8v3glj8rCBlfjILkXQAj2DdTXCoQCgHa5OzhT5GpcaVVRhzctQEoO9E~r3aKjuy8ujbBP5GqDMiFF4iyx2riTBplstqDFFIN7X7oCv5KwrCqftEYooKkX8ssqwZ-H6FGkA~MLs5tM4OSxjzuDV82JfNPiTo~HDpo7QDfCFgc16x-XENMkmamP6jxnWPMQaNVCHgH6XSv50czWQAwIAsNyxZwZk90H45WihA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1732310870&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Dt4k2c51id4jUJ0WbzFUfWK5LAcZ5JqSGckSrMNa7kUbF6FdpoFz7kQLIXpmWUcustYI3xELKKNE889RaUMehXAHhswHjdw1o4IXMJe3AMor6GzcIyuYg~rYxa79yTUFntCdED3Kk7A9Hu04hWeSVZK6vaxZHkTP72-FQrpV0bzUZkpHt-0zhHw5x56bgiI6fatdaPKiF1XlysNwak6CiyeFOv470jF0zWDoX15H9VulB-lY0NSoeaMf1vU1ymo8NBwelNKjBUCmrbYcDOnRmXefh3ylb-cLcLxRCUS2g0y35gQTAbkdUmYP7bUkw75xwDhSsOF10gQWZ9Wq8emAcg__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes