Previous Versions
Xenium Ranger 3.0.0 (Sep 4, 2024)
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Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=K73sOX~~~su8qlZd7E8HCtdpNLSqyQRS9XlVHjJyDBWOQ1tDV6g5MphuAW~V9rORSnJmApmoiBNJ7K2sOu8fCFSPl3kNNtVUpVBt~kCI00l~~x0-2tAuN1mtPhxWH4qrde1rv1RMSBQDb70yafjqztW8UOfY1T0YhJItaPga8Hu5qN5OYdNmckP4CSz54~IY1qZWwo9PHcM14LAvrTaHIM6tOBnlJdOOP6ynct1SD0UAgvvtPKqxzOzwOCbfm~7zy3x5CU1dLxIEWcEBmbfUGoL0XCBVtU5S34z4I~2yeeH2U3seKCn77bAUJgiWvcSsiES3PFpSdwsDAeV7MSxn3A__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LwOzUwUdK-Yv5CCptB0Slq5u~geHYmmv5yEoRwjiefxqkOTjFZ7MwWvR98HOHYrsz~tWVZYY~xXlMqQ5OpFd4Y9zZdYrpFt8-cnWJqWKskGxGCG3mleT37nlK-FSdTLJ8oXMEhWLnGabGNeEqQb5owwIMVE39T~uMyTi87mWSDZPtkk3BjSkxFs0Z4i1aJJA1VBwwZUFaUT7-4yrHlmLkTtH0kQNlRFWIgIEbP-HKBf1byU4iurz5zVcYKwSekyx9AFiHX4ZftqvKKgvXfWLyfxV4ERhve42ljegJ~t91yvbiVR8OkKMiWdNyg78Z~uis0hiBM0nEFCCaB-urVL-Lw__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
Xenium Ranger 2.0.1 (Jun 10, 2024)
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Download for Linux 64-bit (tar.gz)File size: 2.7 GBmd5sum: 45d207dc432226dc003a31a287f5ec08curlwgetcurl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=G~DT0QL6UqtNpqSTtAZVtatJyvK0oDN4OMOBzg-uGRv0D6DV4xnhqoUD783xYnjf~FIwcP7nb4kNZi1rNEWC1C7Rm2Hg9Fh~n4a6gslXp-rcJTddyR8FRV2PBeHyS7JW29qlDLmP2HyPs9D3TTSmBuMBlRG8eUGQCyFnvN7fkLhGAv17TeevcbFsxmR2nFZIYpVOuQPAvoX9OVUGufYxdLXkcn02X04pyYJ~91Tf6E90J1TdaAqjK2N5vsZfLI2cNu4U5bORjFi6Azva27NM3k1WuycCUkA7H3y0k5Qpi0rjAvMP-r~1YYVQ8AABydaVZTovXdm0Db8E2tDBag838A__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.6 GBmd5sum: 244bdbb3d159ff557a7747c03ec487a7curlwgetcurl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Y6BN80GAuAtO9DQUJkwtuRd1XMQFTTvNG4QSSn3xhxFyM9q3INuMplx4QjxpGKqkoexjR6IWidHnplEbuX5UUajjT8k4WEGwgPURET8bUCyBNQwt8iFR2zPf0a6gBNHD8Nr6cVddEe~ZDcvSuv0fglGwwqcXBZ1e1YZg~9FpzNRMlSUfnLH8MU1ImDBNJ~Y4CjJ~rXE9mZue-yEA2hYFWbSm1lUDsoqEXCq4PUA1wlcSUNIZWZlW5PnQTl0hkoLd5MPSJBygFAh5vF-cfA05gTI-lMWm9gr6aL2L7m9oF8k1INOWjkBtbBVhSI-QTgKtR9oX2pf3UDkz3ugIRwKgAg__"
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Xenium Ranger 2.0.1 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Default nuclear expansion distance is 5 µm.
- Enables reanalysis with multimodal cell segmentation algorithm.
- Interrupted runs can be resumed.
Xenium Ranger 1.7.1 (Jan 23, 2024)
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Download for Linux 64-bit (tar.gz)File size: 2.58 GBmd5sum: 51c373964e46c041e08ba73888657eddcurlwgetcurl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=E9vCN0S3AfJoyAAj~7s7WG3TbUwW0p9ZeBJzfhe1~8yFCnU6VS-Puk9a8pxvhw8hhiFW9PdhJUtaxwC39pcr4EoL73txpG3bOOk4UYAHJZ8yM697R78tZsvllQCc2OU2vg2nJNLpNiRjPe3xNx28pgfun8V-7qgCTzB0Rg8YDPD3cEF94l81fJ4Tk2HlDKv1dKKJGLk~AWAETZu9vyu2VeZ1IYVOxufkHhIXLf7XTC6qYtzVfO-FsfgBmDv7y03ZExpi3kO6ajYr2JOmIBDqNgHLHWZdrA7VKv45tcFbYCVcY5BTS--jmbx1qn02GcjmCLxWvXdVeapw2DITkdGRZA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.56 GBmd5sum: 43e6e4433303aae30973682dc5219f20curlwgetcurl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=GwiYByn7l3rLb09ZOpcHLvt6oGuYPB31NPJ5RmQxlCmg1tkR7gEUz6uasDYNJhHek0EIEtd53lOmuPHJ8KUwlyqQL4ERiHmnnyp8BFPaSO5F39iUL5r~8JgxxVG-SyEA~jWemaLH4DMONr-VO~BCoeC0mAg8Q12HYO9SV3rhcwyojwOpmH-pvQ3Z-vtQyZOO5vga6TAWPJ7T2--lu6e7HWcCbAK0~S1rKFMJaHDEk79XcC8tknc9EXPo5lEi8JHEHS3RJt8y-PMQ0XogxyyUAvLPGkeo0gzRrHGfPWOlptLH3LLHkVZ5IhmNpgb2qaJXibeQZZnj55RMAQXhLOMbcQ__"
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Xenium Ranger 1.7.1 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to latest version.
- Image-based import-segmentation now compatible with segmentation masks.
- Improved memory usage in the import-segmentation pipeline.
Xenium Ranger 1.6.0 (Aug 17, 2023)
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Download for Linux 64-bit (tar.gz)File size: 2.58 GBmd5sum: ebd970ceafc057668b9e664df310a5fbcurlwgetcurl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KOT~EpNiLmj7FcSX~e~6YPnjdM2NbqdQgnuDFPj7HivVo4oaKcrC8R5lxH7ULGmHMBytUyui7x57PA1h8asciikUb~AMiSqSTTc-W4nAxyupEy5YYsCDwDQpNei9LW6xCdsfCT2tDp4wOLT2LWPsEtZRJmm6gk4o5muKQ8tIDQBcqxco1M0cJLmMB5AnxOXU3Nujmxeny2U5JsIDEUHNWXmuJv0EMWKt46rMBE8t81XDhdDakiDcJTzV5AsDcvoPc-nMxQ1EYAjUeVh10iQmrPtSsRtnBcVlwxlV3yIxgHMsoRUtWXx3-s9JsZ02j6FZ4MrCCfhhvB0kxM9ualRpKA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.56 GBmd5sum: 6fa799cfeef91264fdc174ad43b6da3fcurlwgetcurl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1744506141&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=O0NGuPh~BM6YHLup0gH~1gANKLBydZO5Y1XNOCpOGIWcB7Ijjd5qMtH3YtcaGU2RIQ71GZavTzam8QrhouAeKRuBbCTn9uWxUVU8Pwllw3OHB740tEYzfbsKHA8bRLlEMNNpbI~Jfq~HkTq34UICK2qlHiNyYJhpeUC9VMcc0wd4~URLW4657fZXqkm6VoSvnNo67i2gp5tiX9X5dJgyyEJ~wp-X5607TerdZm9R9sZjze5ylC8LtkSrZK6eg2NyQo1NLppBtrNQuJLCXmOvgtIXpEmZJqp9JhkyRRloSIz7iFdqw0xYm94zQZwKta70ZMUD4VZ16lQ7AipWzfI0Kg__"
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Xenium Ranger 1.6.0 highlights
- Initial release of Xenium Ranger!
- Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
- Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
- Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
- All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
- Backwards compatible with all previous Xenium Onboard Analysis versions.