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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1758126305&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=OFJ3YY~nSmlkDqxTnI7NfvwbyA0PUNjxL0dUutRjzD0amxS-IkAKoek27IQm21DJuNPKhZRTsoauYnCKr6hDg0o8WZcaDCBLG3qVrsTGuLCE-MQltxCLxOQf-CNUlSchN0QjptRLC4WyBgjxJ37QhHSelLCtENlq8FQk9CZB-xWXrkVlVLLR-RSo6hLbg16f0Lc1xQN42lwOlvVgMpnwkq3HtVPL5~jpOOG-Fhj25qjgYsvuyfMJYdFszILUXb4Ls1sYwXMwkmAZ4iUZj4wJtkCZ5qmqhwigkfSCIBuK2GDuWQuqXQ9ABNBH7D7rgjJNLWUkoVLk29wCf87yrazHyA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1758126305&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=a5H7rvC4ugSuIUTBGAUa-gDizEulSi71HGFAAoK3GDo4E6NJsudSIv6xcTmW2hlGPHBYbldALj3rhj24UIAWH0rf7dPcIlIzhFd2G6~hyiktllDvPUxZT8OVkJ9AC4tCkbQYBEClYuOqXuItuZvqTDz5P0a0wif-lcWIoBw9idi179jrfRKAfdBna1U2ZS8jxuaOEQaLyGD7-Jg9Tr81R8c8t7ABrm5nT5fuFDNr8v4SeAt4kQVPvZQqwf2tf3QmVm~0QWo9jztMARo5dCEVtG1jIcRp6SAC77fVQL3p4UXZOM1HKhmJ~mPORmEkD0HJ68-A~CsFUs~-oeaCXArAOg__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger