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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=iXEcyK1v2OZMzxNOT9kdzMoVKc8iqjcvDqHd3WAEo8p7dd9~stc9yns0uU9MRbM6AkEHji9HMvR2r~Dn0RDEcSioVCuyfQ7doQIA3xd4w2XGv4TeQ9i3ar59X8WWEzxnX77~Xc3yBSbyGR3mg9KyFaewxCbuD6xap-OfQ9Pcn0s8hCKfaYnoRlyWkGM1j8f9-Dv-8zYK0wz6ECNwS8XVW5psTvVpvMmK1tOObJMkLaT66lEcOsj2fKsnYdNLy1YTZIEeDVoXCfEempaYu5kFjukXKSeY8hJbiyGmrm4GJ34UtNAtqEpZCDtIW8FWuboxNI~jNP~X2OXU8-tz1Kq2-w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YeOXrR-q1y2~A7hcFR-gmslTNGPU5QSSS3Ffdtu4Dt5OewcvhnQz4b4JPWMgVP9Z~Hib4zcPF9v~5GPIdv2q5WwXhJRdhPV1U-eR6ZDsdC5ps~FK53u-wxuK2z5gfKIQp0vwbaiubi~nn~aCeHJGCi1hVBaoa4GPXgF20CqtchbvKPHteYaJCDOPZP5Gie1DTt7rrYQ~O8wsq2ct9jUbid8cTfRaCZ21ZPPnr842jFXe5iciWaovgnXazV5khp9He7Ltl9X2dwuMcuTEdcDBWC9JvwZyRVwXfKyMpP0ELfHCtSXLgMU43Hez6QdVlqW5un-UKPm3vzYDb~KJ~UJd2A__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=BqlZ1gdlhdMfMyHydCeUHB9pqolEx1S6QSE08EU2YiqRkaZ~MVMQ7kcuzZmgjRoByd1CZCiMCOfyfSQZJpKou5s2ZSAz30IY0LH6vscNjmtkXm3mutghMQNmvP9lstK4QBTznCr7nvbWUou6TWFe5o9sWhdFr389yufID8faVctY8Tv0lWfISdcqzIptPetlFfthOcUpAigjpWbreOEN6WLIQ2QtlO5jQG-zP9vc3NU2YWRktH8V8RaM8hz41enYkcMsp32zZicaaX-ztF3YqwM-ZYLCul564ANZ99tOZWhKstadbXWN9dpXSVOiD6r2MOgQa65gNwzX3qwlkevl6g__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=gnmwfQLTMWAjIZjOsCx0oeVSLB1ApmH6dF9ydHu~BywQ8jpofff0O851A2KKran0nIF1~4E9CYZrcCckEpAir9ABexr3HZHZIQ1yapy5tgASpCnT668f1unH8SwHEKy4eniYxxABAsVcMHQ~cFDIKt1FD4vN43GetY3GkXLoZjcxp1K-b7kVm0ZTjKnvcjDaff4VAY8Dv~tE814MS4zq82mBeDRCrA0QTVrBcwB5XkusFdcqb3DrI5KDjwDVZotUfPVpPqCi~N1YT5Sg8KwvjnF3eFdYsAVXu6eE4P9TEhLrWufEOnPfAwciOByGeVABahXNrxdxZBv0LbHHsXl1-A__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=HlxPcNFc0VwILC4XcmvGGD6OA1cC3YpenONTTaBy5Yr3C5XkyzUHPMdwAH5r9uJ~gZxfX2QubUh8FbYHOok8UA510qUXYMq-m-5AVEgHzwoyPa3U5r78-J6LptgzCeBR6zf2RpdQEf~ec53hbw2wYZP5qmwRJjly~0aaZ2ontLMpjHC1sWKGnungw0w3g1yFmY5mcWnIfOuLgoz7TzZB-OkmYTu8fvICELCQlPFYvJy-k5fsN0dRaILDAMnh0PZAPeaIt-P8oe87WWHEqzA7tkBokiPzRvi7LE~3HTuo1h1tkDqzRvYAT0rZu1q08TxRcroQc3H5xF9xityDa1BBUw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=GFkMUZAeG5l4eK-4WyXO5845TQCbGmUQl6mXXdelOgOOmdmQ0Pn7FXlo5LZ-g1p1CvjhM7rhenzC6XAK3BLfqkRUQ71WqM1T69b3cnXmYuwszvUhIBUPUldkhiqTBM6GvaqL6F7UzDTPQ9hkBdnwMeNHiinLMv4JsdHwsiWXD7fQjz6drmIZVL7nsfM99pjHwZgAa4cEwBuPpLnXh1l8hznlFpGW4RZh5JW7Hon-o0jzK53f8Em0gVV84aQQK6Osw4tjYMVUckoctqK8K9nNR-eRSlMs49aGpy9GnVX1uXhWToOqZ5cLkDbJ0TFcWUINerPAC7QWSOCMlM848Kk65A__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PQTZDyT6I9vZaV0lL2v2Awbtz0FT6J9lD5rUZUYjligoJY4f90AmDFQfNtYrHLhsCQg8rjt0LSH8Pq6fnektrXw9zcfLPdIBqLSJVhnmQJBkKjuWgHhmrn9080d2dM5giordSwe0a1DIB1dnqxkT6K1c1AlzhJc0lvx~nLrJf48eTc27IYN5WrBRH-8wwYNXaury-ojRWTlrHvX1glcGrIKqrFB6V82nNbrTKpbWcSGSgGqZM2hfD~1EOMnlefieOWfgP9EdqMjv5QBJVcmMa~Sp7UdI~F6OU9dGxwgwMAyIuvskesu3z9C2cELhNa23gyIFc6tNiD2dqj72hyhRsg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1762358746&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=jfrkIK-YrRN2C9MGZieVF3E4oOf1ddU0pGBpBLIScCzUl39aANjAEF0GInwRJUDeRz16XZv2~FF1NHofTjLclB7zfCqdtNldGsUciDlw8HcGZ4eX52RtO6k2Xq2n4DYZEO1HiLe3B1c9WasoFYW8M0gEl-IqMi2BvQp-pfLjTjEXK1N2W8gK5K9xNI6IxNWirdV3xz-8ESWLwsT2smSzCRDxnaDRisXKH-SbIEEWQ4qOPFGsbHTPXiPYXDOkUTvksvhI8CFSjTqbs7Ra57d4BrYvNWwc0pPDSOBufcWKQedqHFoJ~mImpilerp-19xWRjz1MOJxAhW3YJV90ju~qSQ__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes