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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=lGlI~-~FwYu~putciAQiYKfPF8b5O1IVSntz6QqrkHsNvH0fQ7qQNRZmSQHMrZfytAr6PpvwYHnWytsTtQUviN3Fi203tXzCnRzSpU4Sc-gM~BjuFOfWFsPTn1-ra85lqxULSDVPil4KKEyq1MgBBPpTtoofUJFg9rYICwABn33sjngE9ns4xzcWiEXaf7y7qvqoDj0RoaDkf311In9e~ZBc-V7jPf4sKiwtnCAkwq3TPHGbL7m2iMWPjj5cY4wSoEHs68i0-nbIWksb4WxKml~JOGsCV~nzAWmtTcyUjUkSN4qm57qcTrha40gC~ip26bnnajOlCM87L-SJInigxA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=IC5LzAnESt5yWQ6kmG6NpdhxFU6BiGTHX096IsDLy-Pvej96R2aNvpfvIu0judO3LUzNkgPbJI4OyeJ3k7bO8t5tFXOIHpItLvYzYC6LV~SpxAkWURcB5xJVw~YV9Bxy~WWy9wMZmdHPP2FcLW1n09L1fjjBv8-q44sI--Zti8NA1LZj0l4-qIDMqrFyMNilmnBPx49YVBTggZUvtfYRrA6Wwxj22rtQzzF-iPbAZUjtNEt7OujIbVCEtmbAe0QVjZLOJrci5wLZ9Vx1lmZiJs4~OF85n~fGSS1L9C6Kb58J8zSAjghZeBfne6VjuDsXmIKJA9f4Ew1ZUubOVENm6A__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SfXsgiPVhtZUqBU36IDjzCMrrKHYoA9aZS5srKi87ovStEfJqO2P349-OswrGJKhjPulvs0xPV2Sdm3L109hSTUFXop0zDwhcNz8DhG51y7x9RNBMhSF2XD45cKlKTYDbvONj19Lmqc~vNOzWDE42aHvLiSN6Ubj-I6C-KiL8Lxcs8kyYjRQGh~Zj0XvxTz3haQMAdk9IUE7MHvW~zTGUHIshkjOjwLEq8JoatB0s8d57-Q9ZPwVgWN1IXqdFJ~s4HpcXj-3LvxGy6XtXZZsJEDx~1Qe8k052chtS1kLprSOoWd-yMp6l9be4l7tfT-yN1rHuoLdzc~XzLMaYDUmxg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=iCKK~c9-fEiqIiUy11O3Ehc7hL9XGTz1bD-Dw53rPcNGtdKrDrHUYT3yoloFU~r2K0frk0TBLqDe5Gg4AGLA6ZKrcGADyhVRSLwQH0yOY2qUA0-ujj~rpiiOb4yk62l-~ctyflMNIpQTOl2qM~zxmD-Yq36ovzohe9LElFA368VKTBvg~p2iQAm-Hmogo675FwqB8i9E7b7Qqk~i2kf5H1mqfZ3ghA1e3zXOShrxnb6-xW0x1QgSry~TXdCnHSLjyuCIQyC5Uq3YW-Y9qBRpGmgUj2LqL~wWOffD0cI9Yr4sO7wEFUeZoTLMYt7MsdtqR0NdIEobHRdjpQP9EghGsQ__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ko83CMMqi~xZlNvpyaE0i8VTWaiji32SMIU9LlFWqwHbwqxbYq0ksI7GVMfgW8yxSrubXUyAVpOeJboWTmaaI~Oxj68z35BK9QTQApZGzqxP2GchxlD0HQ0xiH-W9uUjQsCB5oRfU4lPyQm7SCE3pcdxCWZKk~vjpdHqA0cBT6AM3-CHtEc4ClRyPW8255ut6NakiDOc8oTMhDJF4JCmtPnhIeXfdG48cWfKTKsam75pQqu1PjpwzBPAxepgdlLrFxoSwLGwhuTr6nckz88OWfASFJWtpS4zEYQ~YkAIMD-XOkUXcGJTIvKSatStTkcV9MnYOC7IX~kP8o~6pG1fww__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=HtdLQ6DKzl3ytjBmpKxC-2B3nBtv6HxeS7l0-tJKALburYqKBFv85Bnjm4i-N-WLeQpiq5OGcw6YyYLBmbvh6wysMdY9HHYjgh~S7V6uVwnyxQMBlXcmEWyEN0jmt5Je3omByeGjZ5j5HMQs-drgxF0SSuprvKmGoQ2lbIvSStgQO2ySRqVIrj7TLuqowRNcxPymA1CF0rZ9eEFhAKnQSWtSrUURGza9QPBNzmObzlmTHOtFHOz9boyZwyGK5wtwskZI2UY~NxjvQTTMt2HMGM5Wbizf5evOPBCigQ72Z4O~-3yah3PYNo~jTUCoc4NdGIPdPpaXRElhbZeYmeciRA__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Buy7j8PipO9~7~pIc~HLEB8eJpmk0qYHOEljsEe8H72P-mlC1a45ENrUr7kXJx~R9sLqBjiecraR4bZMXynV6e9Tt0MPRKTm5UTpR8bQDe4PiqjEd0XOYM2rIAzNl4YxduMQjiVvWvQ-8DokSyneIBYXROLo8MhJc1B37yrdPphzr8HNsjt2t~Gf8QNYdmcnLRtLZ6ROT1GvIB0pVCQf1KEVL3MTjeUcBCywgXTvIVGQxl6yBcf0l6jTURzQt9DYuQbR-Fy9rClRVQIKvXI-JCR5f5OJ52Y1BITuaz-V7d9ewGgHPrp~2k-QOCufuJK0N99xti~60YkRkk3ZZEkNUQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1745724028&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=b0zgiDE8cln2zmsx2QKlS3z858fpInreVy~1TzLlMEttG-ZMEl7glOADmluawuRKJ-wi01x6gkbaeRfiNT7EkN61OCjH0zH3OInkcrPL4LgP9YtPt1WHaNG0GTy6Wjw~BKvKSvHGThH2wF2~nfILNwfy5w9sefFQ9mdghfr8RZ2ZDkksS-qvFpO86pBu07kLqQRMfkFaw-K8l5C7WROS9Tv5Nhzex36acnF7ItLVW4nFg5whLeF-PlgjnKF9l6VU8cn3bymnOrxDKaML5~oeOJTaEk65Kuibnf3wsoF1ZwGEnjQYSKahLwf8ptCpPWCO8ubZXGsxGMG-oXe4j9747A__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes