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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=A9gZ90MmBx3Lrk-ahtUTfIHXUaJrHjv7Q~-UsKtfsBzwBDnQj2xmDxLm10gcbwFuwyhquG8HfbaGK~K7kg0yGV7KtLCCKziEHW0i~6e2p1CCEWP~bkHPRqPAj9vB8QvB0u~POqSv4hUO0ENtP7rUpzFjKEW097PUyBgZkkwO0jsVip5WECYIRHDYtxhIdEMfdmXJBn2Kk2zKP~MR-4j-9DG2ZMGuRbM12LG4ZIGwcDhyHxC6aRdEaquA1pqAl7a20mZgvWA3mal5DeqaJVJkRPGh9VhlZGi9q9RPG12QiNlHKt~GVQQadj3NGF-9kwgtEoWlnhuQU5XBj7P4AQB91w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=icXT9EzOfjU0MdspnP5iLNTtWmUWiHiL70Y9aqOLmJCJTLTLE5WKibYp~IdeFUqVMYjKDEVZXQdV4Kz4mmB8ctkSF-5xKMTQBcZE6N6Qt8jQiXWE6O1s~qjQYvrcK7yDepehjme0OKRUQ~8RaK~hdDDsfaNsQ9pr~3kc~fEsp4hYDbHViginuYO8LgwF~oS05ypc0HdqyguN3bFlPJIuc~7Z9xRDHNW3pOPD1RGzRNCeTa2hdy1VoKwuE1CYsnq3u5A8WYEfNoSajXCVWJ9wVV8bIwIZXR3eDQt3appL8Y0RyNMg~K9ZD3ZLLU7xQG32oPsGl1Ygw13O8ZYodAeS7A__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=XVe~bSMqRAh9OBBJEAhZmG0~6LrGbxKJVZtr~jjIKQshAeBVpwMoKxMMK6dVKxDJ3A1C3Nahy0lwi-zywI6gbFvzGijfLGqdtv6sKIGONaFUW9h~xMnygyp0EHhNYQz~hXXorGXBOds7XekU4sSwtLMP9GIdzqSYq-RbxCK3HwQuRVnNCJQbE-38wB1yLzbnx4x1SJJE7CN1fv~NVVVKZ8XJvGOeM1VPr~Kk9fl9aAoVHfx3tcBu-ysF7nwJCDz4aRxbjDlC4e~EqmQtJnri-di3NhQv7FH~5WJATniuayHvCZmKREMPx1w0x8yTEn5NAL4eHBRXmeoF6MPv2L3bew__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ltKYUTOke8S3XZZQdg8ZAhhukqhcDCF6nRY8CclmRuRrYtkfrHKc7-dnVzTMAwiLkqrXhxZocCNGJsfrp2iMjWae2RezwXExzL3w1HF2Yk5b5KxxbZ8rWJjyV8MqH7vnk56q7FLD~QuXNr2aSFVMDK3aB50F8Jys2WdNEKO-HBZvxVZOlOHp9Sp9-mqIRMBf3MsH5pDit0Jnp2c6IZuZ-JQdQ5-jy0Wo8Zv~Umy~lbI7stQ2dvV06xMX6qpXZwj-A-wtX2b6jklPOzo6UaAY7RhyEFqUU0Rp64cHef8IXAU9dOz~pBTrxiSqCmqpb6cyTx8GwagDK4DLLupoikwt5w__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=JZfVi6r4TqW91g4fpK93HtikX9Lrfcj981MJv8GnGIczZQ1FPth7YQEcOK5xnJNFqt7OU~Rby7n8YRrAFqa-kgLJP9UYQhdyr5A6jN0JrNlj0XUEIgyF3jqbTQfHfTN22oMSJXwdGI16ftai6QgpeiDnMgmGVBdqgrMat370nRcgWcP-2p7ltRSR1SdChiykPnufyfZRagQnAdFr0q2yzloyk~jb4SR5Qc4lpAdU~qnMKxuugic-fHkfCSGgQ2PGFgosa6Wl0trgm7ATRcy8GLJMS6uyXjwTZoSe9hJGcEYHGDtH4Uu4lLHZEYiDnzpLvK2gN0ZPmgl3dorsBez~rA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=nH~npJlscNo8pMj2et5Zz3SR92DIAkc9bvpX0syquA~lwyVIuU6oq7WbIzk2hu4cv24T4XNHFcINtmyMptOXdc1MqtOnXONYLRKCXlRQ4JRSmxSOxagzqkhdifoEMH802rQlRWvSwVlSTyAwJlOqSFMSrkVdqV5jxWmyZTqLPo1jWOL7IrmnYznI~W0HhoTSxyzWSa7RuZYrue4SkOSlkp4BfC7uxse9tjyGKZcPgemrVM7bI5iz~s2ZVEcxALaG1kVfhum-4m8Ofqz5FM~EvPXIsDyBzn52oAd1J-35tA1ov7i5Q5O7~KgL3mdaJV30qHkXHApD2DZSeDmVDXLg5w__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PUw2sVpH2R55IRoAGkyykF1YMXworIx~tYYmhiMWTOCCj7brKqiYm1tieScreOX6Ad26NvwsPdA--W8JXnVtzhTELCrWS~bJkPwx8Yj5-fSqP~Yy4X3fJT-ujvp9qYxBbtI61FK8~~mDVXaGIUg87wL7I01QM06SI20rmhV1Cx9q~P7EMHaa8Gw5o7fd2HoXN5b1V-sE5Jnc~dckUcdhb1hTpJ8FnriSJxJc~oTZlEYzhKoA6GJqXzUcAmEOe2JUIn0vkrhkkC1wIot71ziW9QrWuAESHqNKm5euownDFXcJcerMDugkWAm-2YcZCsNHYhC2ajwXELXD3jCzoh498A__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1752458731&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ZPgDbT2roBPztQAA03DwEx6KUPUqr1joSrOHxvHuC3BZymSE6bFcWA2oV1PR58JA7~05zr1IRsc1djmLsjGEf6UqcJoeL9oul95byRXeGYEnBu1xo9dMyXkxC-ZSOArcNyPVK0bKHtnnzvTQCfpwTgcyfyy1hWwZ28Dwtz9PiTAGXq0gWgOBdOTcgOdRHY55TIjvye0JqTUpD710nLniPY4rs6TioUpNPZH1DocPM97m2jxdyW42cCwul8iO4h25oSTObOA5PAt-xJ5pY7EYkIFgbttmmyqGBthusQhBGZ2cK3mZ1ci66Aujn-MKkDxf0FTN5hcpEV4j-qMi3IGkLw__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes