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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

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    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=B1zlycSSBxg7xmtXdyX9e-NdMIprC1VF18Qd7C0QLkggcWI4Wv1aTE-1VZnjyP5mIGiJnWtXyvCl-zTlOx8mKRZgU0EeM7nmt6zAUuT~-oi7xMMLwpbVRf9RUg-N7ueOMJREUQUu~UEAv4Ns-bdw50qX-fwY6~8YBJzDeBSOezGFhzE8pVPI0xT8~5N59bXhmUvGxU5vVz2nTtX0OP4Wba1cB69hett551Ofc2kNPYI5vlV8ge~hg0DFd7ebesT9lBDryd-vunbj7czF1wWqgGKKwhUs162kZrDJut514vtVnrNnrfJmOlSA5FjMK9Nj086p~jJXPuiQXAQQDMb01g__"
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    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=lKi4Nc4JrAi03Auv1zaK6WzGybN25AHq8LUqOsc73D1dd69ELMFUQxhmPh35ovvW2a5Uff~~3Zrwr4QPqKof69ZyyNsY1cMV-FksOpMmlDkj2eWo0ZEvCTNrguH6v7NIb7vaGA6j50GYUeGW27tB8oJxqsagZLAY5UE~B7f2frU6zM0j9uQtEFOnzJG8xowplb-LfppBDVhw97oksFAV~S7JkLy0zBwn-aarF0kDjH4SxIpkr7fh1HUQBJ1oM2eRYjxIEzOjGadG2jb2n47ga94d5AVODD7Rw1BbCSLwaNIYkVrYW0W51ZV1rVWRK6tewMMAdJuIZM0geL3G6lPk-Q__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

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    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=QKxhRHVA7HeL-87JKVlU9RIoHfmfwy8JgVwr0dG2IcpJT3C4TlvyxiZKe7k2~3VEib92rvoVS31kp2rWTRm81UW81Ym0JkxPFZfqNriREaaCeCGhCzF45ooQSQriVhJjDflHvOsiPczVK6y3Nk3~bUUbg5NIm2allNaOxhTJ3CB4L6Xcx4Eoq7Vr~24OusFOOi9PcRHE3icv-vxmWHiGLXFBLQDWzl4MKZw00YjWtUWUH9Yob2Z~V0~a8bB51ygUsTCgtj7Kr1TtD2CzBX3R0WfgGzKI4CGG5BWQuGhpsvdiCOSR3a9~mFxEbjNLJbuMz88sBF9XzByrC8ydR-wuYA__"
  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=adYPq2gG95OJ-1rrKnbdeIkJkZ8G074LrTndXqiH8AuKazyJSzFSHOe1qOc12KZZCtsMxm0ajOoXsozFg0gSaLck74zsUBuAU3eUz-oVU7OJeegfyWNWb~D4PaCoMz0PSENfRbyRs4iJncjWKLoSlj3uSaVUPK9v1YCNVGKViW9VMPL1YnB8DrJdPCU5j~NG9vHfo1AzwlQFioMtbIrhRDfM4-42zVw7a3El2HjkKw-Gsqef5QXk4OczU4IAzgpP57i0vITE2Z1tE~6iWnJJeKtyZRiaU86S5jcvs6hbtv~F~K5picRRKoK9LX58nIWcjePY1aApOvytWAHakEkS7A__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.

Xenium Ranger 1.7.1 (Jan 23, 2024)

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    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DMRJv8IukyVD2Pi0iwX7LONbbs~uZaUzGouYqM2Mk1LfbViOjg7-G6aWqKWcDpa3GtA9VTBRSY1~RUxP~pGy~XHVml-UBeT0eg9EMYDh9VIUlkwx~Jx7TTfbNpokrLGmIv-HBLWeCCWm0nw1YbsenO-nVgEezZw0RgxmN9C1rIQue9G4LAXrJU5VVyHqIc9-pwfZZWUF28rWFqs1KhRrUuqzazqIBxxOPKaN6Bd34K~Uavefw2swcbx3T6nsaMK6COFWcqh~nHNqvD7-SDOJdH44n~-0rBpt654OnfXlqXNhulV77-O32dUHxGCb0J0objv43EBMwPaaSNe~bWZXLg__"
  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=QMszFm0R2blkU9lS3BbOqSHMzVrtRJcQWrDXyTmpP~Bdxk6pOc9xV65hRADJECIIjL5WMP9P5bjqDUIi7-rrIoG1lm6Bv4ZrJFTaWRRXnPYiKath3aUhKbcCkaCbkLlB2oyHVnFKGm1GCokEHcJF-9sU2r0pBAb7uBp~pvmxyoaXyAgrHaMIEKrHW9oxQ7GkByY9huomKYdRPdQi7wb8gCg0b~sXv0HSUBjnbca0ZlR3~IPJ9hEEsyidTa4bIEVdIRLBkgmbmzALXMq1oTrwlTSIaI6xCgTwO9JsaESDbTJ29sNjSVwhCDtgPyaTpSi-GSz3tLWywLGgWkxJbuEYaQ__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.

Xenium Ranger 1.6.0 (Aug 17, 2023)

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    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=f~XlFRgG8ae1NS7LJ4CTg47kxdprObPJGA2SdDmcxAT0CiplP8QHwT-xpBhnEwFywwTpI9g2gLR6Ct4u4tj3VtJpS~i6HGoqgcPcdIkE2kiQz9HFqLBHmqVi~w3-szd5iorEwjQBJEiTnWm1n89DPCbvp5AaffFKPq7fXStl38a4CYVQNJIWndgxG6YwKjbjqc18H3rHcqciJy9rbRbKhRJx75LEd3-6H7pBJz~qDLD-jGnVLw1qPKjnU-X9t5vzpv3y4UU0USLNet-Ksm-hRt0uooAHjfWg5Imk5u0ouZs9WVwRcUz8lSDC1yro-3oC-6u3-JYMsXuMjanv9vUT1Q__"
  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1732313347&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SJpde-JXXz5unskTw4p4SW6zCfSxUtGZxSBZGgX3BRAJLqm0mXgxWdPFtGeRxOcuU0Qoy78Xx4oIS5kn9z-QkgJiRgfPcW22WSuE1TVNqrp6CYdCSPMKuQkEcNLMploeHlNJejfSrY7CX6B1ZRGDHvjRWMZT-8FtHh~TQErzKqCKdmkILgip1YOGeCWNZt~zc5NhFL2TdSNHcavpkZqff68x~1Uw9r99FcAFyYDs9wfI5c4mltr1hJFC27XXjdlGjxG3s3nV6~kJ~YgAfTAQl2hhYyvylOeI4ECa7ELKmcYFaSDe85Q9bNbbH67tBXFaB24G1Rrmrjf8RvK7D6qKYw__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.