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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1758143675&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=NKfiGsKNoA4mQ52ElDz7ty2MeZLV1sksGe58AQeF3TagJYCgE-oLt8pwTPAxKDIQdkf~8o76KK4rz-K4eE2nrMmSgT9zH9ThnFPjncMtmepTNSJMm1fWodLRqtwFG7SU5-WKormnpUZmzssfFLO9xoOGizkXaXzrzPBQZUzxAqQf0IqXSQhZDVZOoe6wW-yYBQePX~aaflg7gt4LBjyidRd~sWufRUbiVpjy1h1uMhGHw3GS0ZeMVCElCudf5f5XPTubLixniW75Nm8swS2SNrtj3Evx0Or6lZm9TbeqSzBH6nNJFbo01M1P9J~WxIJbf5OQbigoIPkrgn6zSI~7qQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1758143675&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=FdKDKF5ngM-mIH-obSAMHzI58NgXcq0waQ1fcN-8aJIYjpH9w7O4PjYlW7QuAucOtO012HhnnmlGiMFGVkuNsZLoI9DJjok8YtMXsN2ivC6vgfPNS-5ebtdUmh-cyNWlIpHWQsWFZZiOGzhOecXJHQU~hYgxys0uVs1XI~HrHrL8wGgg0QEe9~pBJxdLiAaRPR48wxVjzkYG01VAJ-~oWA5p2Ed6YGeAKKUlFQfmazSCi6LsMiV2K5HVUWVxq0-xVRK8rZYpB4f1daI1mlRlH0XyJxHFS7Zi5WlBQCXY1Ng-RQUu5W44dED-wWmw1pZ--3tiPjJiwSXrQw3WYoYdwA__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger