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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1752924824&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=azEyNkigZlfpOS1iOhni7dwGgdtzNGiNGd0CzcW1PMEyMBZUKfdhqSUiprH3OEh6b4OO8SpGjU2MoJpbVxWdOVHkoK3x5eSCc3PK4-huOFa6laLzn7S5KCYSvWtfmv0~OKVJOYpCgbD0Tz2I03e43FrWOtp4QPRxbJ3wJuHF34BqfrDIHFDvb6TN6fqAagdwH21k58rZCS3CU4PyDfu9MM~ikrjxZB3U0h3BRTBpWnmer3S2ouxLyBdTmYb7AJI6TPer60wa6Q~ACrK3VFlIgsRF6MBHhFOQvKU1oPU215K-NwTmGlFwG8u3kiROumt0GPacTPo0Y3Q3BZg5g1U0Ng__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1752924824&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ogxYhtJ3g1ua7giNWaWA3YUF45J9ts3A1D5XNuSt-MjXtobgK0qnS-wU76VGM75PkCmnI7LLgTETADY-rLaq1katD75nRni~VVuj~WEJjWixmIf0kuOVTcOoZdtvz~g~SG6jZFOZtrloQPJe7M40defveZKxKuQ0PULk~EZqxGf2pf~EvwEU97OvlvxlkQY-V0-cL20bD60ANMEiNZTyI6iKcsCfxorGvT4t-kQRHXk9Eb0EgfPims3p9Oe3GnIMuDrHwi25lLJM0Dt55mDPN7-IrZ3bmLtLd8I~eFWElrIgHvwk2vDV-y5LDrF1rcXyyq2oSot52m-t36qCl~rwOg__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger