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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732291441&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=A3nVAUFcxLPQFwknkBsqv5EPPVqlSy34kGwBlCPDtgf588A76j2nGn7NsqUkrA-KYwnpOgdb42MUmzgUzmk~cyaXeN~72uTGDFmXzwH4E1n~Q0~eo~eMcWgqPZKTa4xM5W3fO5KIwn7yLHEYpjmXWexRHnf4sEBMNufVdEZCBLXrs7IfDL6PnK8S3u8HfCCna-s2qhcjocOu9~aEtiun442rgodkY9hSEIyxnCb5NRmAbF-5LrOL~IIp10lPR6gI8puBcBnmfjGdMGBLjd8bPeDcnJBftpjJL~6gjwhHkxskaJee1J65rfmuqIhmpem3ODUW19MwY2b8KM~4wCzGQA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732291441&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KynuCPUlx7PlsZAVwI3j06Dnnali2CtQOeQtU5TUZWhAZiiJs7ASXfL~7b2o~T2ebLcFnObqTMHDW-fJrY~bMLI32HHktaDFUPce02zRFQa2IslGiZo3gQUUEbD87jQFwJ6NjmbX9qw0oa2p0C8KJejk0LGBgtYuMBio~D8m7uqBMvwNSXlMNFff1N1KutvrE9rSWPLRtBZYVjqXdACuRHt7EJRvFQ2PRNkrvvotlgSJ~y173rpRM2JTq79TN~KSaXElAYV0HDYK5sO9~bp78YxCGe6xrgSp34mymtzWsOotiuEGP3ey-udAAqUomCyl6c-l7w3EYpN8UnrnhRfTqA__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger