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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=jKahnMhs8c9xpg4EdkdmMGqz3zVI6aSsUkhvNCvuxFcF7lpmC~IZb34yGAHY-qkaDgM7xHdxtoNFO1ow50RFZdGfXpnr08cl9FFhNip7mlK4750TO9OnhGDWSw53v8kvPYVjUP6ZrdnC9zqPQnTpftwBNOMRIfFBsDJQnF6ldts1O668e~wPrvyGrqogD62R3V~z-vTyBqViWdgTAW14vXS7sVDNuSyYagX5WxEvtZE2HQGbsraSz3oER0Betw-i1CxuXnzPFLMQb9R8SN4FpH1ZkYgeu5~KaapzwWiEWJktgtyDaYeqyV13B2J8mQ~OvY-5rxruOfFqNsnWaQWrkg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=B8mkh2TqPsdY~SHAvBF7gcoBjy3dL1dVgT71aV3GP9rQaUHN7sdUO8zN~SoNmfPTWQJJUyGhRKQgb42GnEonZu2WQuwwfUx-j1mt0ttaV8-t-GyvlVnC3F18az5MGMqhAVZc0z8Br-0iB7dj~f0y~bzyvLxj9AnqPzLUTvXS6WMtwUt2DXtL1EFaQ46JwobuPaAs~AJjRU5pTRrcpVf16SbfgmS9V6xf-j~KZD7VwNK3MNPKKtFgnFU1HiSAxGUYAtaCJDeeyE4QxA9Qnm8SJ4fRf5o1N4yivSi~gZNHugRx-7VrSEikWrait4R7JyYyxnXzqJN2CK90MJb-ZXkOLw__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=JLgtVxiXk8kBMTxD~WEY6mLo0VdID3SSsg5K5p79Sg~CNvFF1uBE3Ty5PskenG~IzBAPfG4BwKS6atpkeadeasY8qpkck~o~QfhVvhjI4knifxkKdsPzJ2Fq-XVi3-aNq58VlBMa80trAAMpc3GIAHWwbXZ-uSfSqFRFqR6LUvsh6YXcMVFwtqe3uxMAEmabzK3d~HvBOJfzKW95WpWfQExNAJJWDnrERW81NiVCi06rdlN72EIqQXeDQeRLL9cC86HWSMQ~mKmauZue9as7BrVoCamLyAkJpeCAOgYqa0fx2uwleFN~BlCjdjAXo~xND3QRn-nUh0YTfK2lnwLZJA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=n9-JyxAcv7jdppvru-G9anDStm33KRp8ejK3LPTnz2Nbj93VkuQt94KLenusJZeXomJ8fUgrZyDW9IY2hYyLPhVox-tAFaaj9AXD-GGdW4nqK-me4uNPjd4URI8rGNxr-79aEhP1LOCBEZOHmiyZmb85Kn0yvnPweju0Ki2KEe1JbqVgy7QekarNSKyPLMGeyk9KMtxDvXA1fbIdGaCx~lDuFuZFRiBGXomUoW1HKpK0ROytmtRxMamg6Vw4HO7L2eHipXg1xEIjeJOEd2-uRmZS6x9wKO4sQ3qd-qZyaWcwa2gzDp1U59WjvBrTo-i2nZ1sNdE2-uLhieQCY-uidA__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=gtaFKA0nYr3LjKgj9uTbMvVyTLAkyppguKSF~1215tRXiqX~MQs73U0OBYe63qEQU4QliNIZWGxi~jyOYtjnDopLoHFY7P1lKARp07LUp748AF7V3yE5-s8ADrzKJN6cMnE6NUe-CISMU44TjwCnpSaQwvZNWB9GysScpwCqORm3XbX0TUnRP9eW0ZloRdbbYfbB4p0I-WJ1CTdGNzmF0dm7vUWGNB9dWF6yRtM89TDoOXAmcovJjB4UX4C8n0xQJpQ4HNI0Weid~Z~PoJ45SvW3~ed7HSR2SYOCV3tl24g~lTIo5M~vgIlqNvH-KrecJESFEXme1slxTdDmtjzLNA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Ozvztxf8xNht54-iy5Vm7lCxXyP3on4GnNGcPC3rLIF1eQV9Bm10Kc7EeBsLXfLcgqKzvyxy~xAtRBf8HaqsrLtIDd2t-~aKSjkTRRqsejN427~hCrKycf7ZEoFBXV2gxTlUWmpmBW6M8QYHzn2CuAhqwQOl4Fx5GnKM2GS6-5faBSlcQH3ix3aLFtf3ezdH7AeXd3XbH9jm6WVlPcrkYsrzjZMesKJCHs1UZ7v3u5FmAmC-Qoi6mFXqtdqJVs52nbLPh30jdm3~pAf294DUBljrusjloWROj9NYrtWXt-eN-riaM9oajwJSpxAmpOu17IR94dbvB9Qh3lFSKFRuQQ__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PWsZJ85b9LjnRRZEb2E0BRk6mAZIJmFvLhJe84~YXYZB83VFzoodaascc7H5dMzPF1PCbSMafo0a6cRS1RdQP~nO0jYghyzzlC0xvzrtOsL1l5weKT5FV1hudfuCaC8cxjC0ghE5FyvnTFxkW9pQC4liFDsw01K9dCVH~6uc0cyRbV9Q0elGvRbEmGb91fIhbbIQBzqKw2g5ITFhkDtnUi6LGjGZgFfq1EzPexOGc52uzho51Chr-TvIYvHBwKqBUorUqLGrKcEj8xlZHLQC2rN0wZrMK40m5f235kMpzRzKWBKndZRrz1HTeLkEhH91QIrExZVnsrgkGzrUpGEuRA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1750121439&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=nIlG0JtwW8t6SsMZA~oFQSECF1JH2yF8F8tTK1WoLiNx4YxIu9bT7gNeuYft67JT4NHkoEfYaot3xylxFRt5a993hi5Kwpyh8R42JOF9bWAdZgNSYGJ4zqc1TjhzrmgJlwhRQELWLCUqYtYmHd8G3ZRNrisFbIkIeddjsWVSZnpg6SXvqPgLPLrl-guWiLpvC8GBKbZPVVQShsz7sNIH8F7ne2SH6n7tVVceT~yaJfNwiu8b4H6vS5m~fRlFVx7yCDaesk8O3yGxS~WOZY7zfwb96hogWNDYKaS6vQLfDyqKIKmycpHyPVGAjhervLJbkVtOrJPhHOI22wW1Mc0Ctg__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes