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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1762414076&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KKPtcA8l8sDL-jlKCLjJhA5jaIIw-jHeq3Iqgh7D1vaWZMtizxob5wKN2hCB~2JOr9~1X~LJBbFyRrRfaB83Jpk1vOdQ9dzYlmquKdw-CNPho62rT1TGdTKY4DvDFyLDeSIXaCVw-6NVPbWcSAnjjVd2Sw8HMIzk4DqY5G5Fri4815Na2WPLLcCDxNP-95w1ovOsCeHcVCjMYGSOudx1wneJn~Uc9CzNpVzxtEL52xcE9LKOi7GH~tU7KOlrvVP~D3msuF4ZcCfAAoTUaFlHDi0iY2NvvOn1HMAgOLHUptAXee9h~hFRu2Y3iBZhpbcD0hSEJh4HvDDMzv8p3eJCCQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1762414076&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=U877z7MqV1Ho2JBat~cFoM1Q7UVyyolM-Lt5wNQQ3UJI5feOCbp49el6-NYOJbU2PYfWHmumRDUCLmlvRT7UFW8HDIGaaw3ATKV44zJY2aLqiNYKsBXHKHTrjTVY9zy6j6N~NX9m5wr7yJXmb1sV~n-ldPDecM7cW7KPxyKtko-BszIlJ8VN9rFk2z~GRg51NDKLRPu8mo6W49L2wDPp3b6r5qK8QrFJ4jwCgbqVcwwERgQDwtYRyXU1p39hKd4zT3ivUWvqWfiMwH0fkLGPbBu8hSealWlGqhn8LS0xUP4~OnYNBI1MR5qghkPTAZfGOP~CvgbbHzy7Hz8riBP7Hw__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger