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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732236648&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eE-Dy4eWAmtIVKnhD4lATjDQXD8j7wVTDKMrErTr5mxkyUc35romD7EWf4Vn3erMSqMq69HDNlNmTjOm0agqC66WDckLaHqb8aTd8-fJHAygpjEwQcTpcHrtLEMXWitIUtDt0jj9qCK6BQreS17fo01KWi3ub62ZB3oB-93QIhcrMmLBrLmQVL-3ZQc6Q89aUbSmhsvJPOTdV1fmYbMkcGXB3K-WinVXOEjIUZLUyFfvONgMYZN0dzdhpwWsRuBHU3Hj6LjrsTz64KkYgjHXLB~gPfgN8kpTl-Cf6CKkX3~qytg~a6O0-~DpBdYaKFgXjGDj38sTqQll6zDwx9FMKA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732236648&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Gk~E-hfOxViBmIIy41DkPyT8q7RrKajTTCcQW6s9GJGor2sfpxiTBCLvZkvHR~lbLthycAQlbQ5Ae53zB4YuCnCBzkx8Yo-26lO2~lONV70NPgvKVZ0~pdMtDtPgFx5IBDON2urJ~EAocVkY28tFVC5ngPZXMiP4l2aJrBb2hq6z3H2DtYfG78gUpU6oJUh86mmAAWPzH6MHnrvwBVRWs3uEhfeMz1ob2panT5XCxNjZJChRDZYrv5h6OLsMQ8Faob7TVLpDreXkakfa1JFtq87ikPlar1uIsFfG2MtM7tm1sxoKfRRD~XLKqZUaRjDTkTn04vkmBSbdiDS~yufJpw__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger