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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=CGNQazh01g13DaSgPq-oYGral5hCkhjb1OTjBBnfrmiZtJsrgtKx-lO4c0BL2fFlSohJrKncOUYzoBqqfhcwTN4ORgitTN6RMXgSFPLTfMJs8qvMK9qhDDsW-XTR67sH-JdkBDHkmwOEzZhWelB-uMxDo5px819~rStZL0RswV-moiO8nMizXHbfhxld5NgVwYnd0vgh17VzXTgrgowc6x6oN8PoVMg-M7bdkwGc2Wl8Txa3467~P3XVgA0s7ksGT9hL6~Xqgg6uLp8n-i4yR6axlQgaXKpL-t7Lopdkg6MgiMCGRzC53cEReKe03akwEJdHXQow6wLW-i5qeiUTqA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=gcLqPRJblLPL8x24iFGz48urpq70S23C7zRqUsKV77B63~q0yv5ZlB2WfBBqejH7IJP-nMc6VsR5AhJ2Asv7fbpULp8Rvwv4HbBSs-s0jhYVzKs19MWjV3Js8rfV8pATe1ArAD8Hz9XnuI30uBpT5qLopkQLzjP~KyHRaNSxxtKsdSMuHO54Ul4pGRWE-qlkvO50OS~~5gj9C~O~F-Va5ImbcRpsDKZyjYmSiIMwFA0JDXkwn6zSOdr8cVt0BzG0yOpz22C7vkv1bHllZD4jyPYbHlbOBtkpp8zq8zFpnS6KI1xX8QO8ejAVrziWwajabWHrcOArZakYPEK-sY09rQ__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=mhoR6vP40VXVoj5-hA3e1RLbgY-iSaeF25TYkn93nHIsn-wc7JowpuUECYWhdkDs6CSjhtnqVCIfIhoJWGN67ZWtbGIVVf3GoqcDxfLqe20CtrFA6rPVdXjFe6V0brihHX0NJFbAX8fkUdc-5VhIEjZBxkoIf8LOvSYTDM6GMG09LrmBRu0FPmeIkLtFX3VVkavBu~nmOXT-cLYK5ZN0hShGlSPxMuI1Re6Q352FRVtN4uHjx~j1Eju7p1sSdhhL65qmBPk0vkSoVp0vx1EX8bQHv5shhzp6NHGpSt8PFNniJBMtOuonmsVvj3ZYJYRV~DbkHHO9lSLr~019Apomdw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=m0~Yg8jDR-GrOWj8UtEPRT2TC5nFh43j4ZX8bpYu6uAfFqUP71nmyweZdHJ5Ll1ORgKtJDpA6CTsFc1xuVdMgyztc9dUtWWs7Z7GTLxn5BwLjLWbs-tLYeX9O2TmGlO4qkvxYDRdzU9ay2BgdlByC3Vo6Foipsz9lZ4SqgXO7WHR2AKnWZ12jcbco4VAN9wLvpBFOQGPnh~BHekMC3vdaVuOatYY-qah-G-7kArV8PoaysJXI-PexUOq4X5RXsrCdRt~iilNRD6fb5xui~ITHUOR~JlB0Rr-g7kNAAbJmDyV~pb3FOrwaskk-U4GHY775-z2UauFfYW1ntVz6mWI2w__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ZrnyayY7KxmTmjgxK0KavtkMsQhypm8FQ7ZrVENc60w0q2ZKjQlBgNEv-sqQESNZNKeUKQytS12g1QcAYntnOFz2JNQFjXhURKunjK-srH-m~HI2jn~efAdLdiu4VOPJCgX5J8mpx1VmI63AV70VInrNaGoYip0Zo~eL9VisYDhjn1xy70O76HHXi4v70DpdFYmvoo1OKlpQz7JZIeO3KtSq704tfrsgi42g9vzTHV7OnyxxTOOr96DfpSsHzztmfH0V7eOqw8ocGSYAahhYCyCBgtTFU5n98oGZvL2vBil5OoOVncURw-Jk2YkoL-kEYRAxVai4iP~htnlbYXCr-A__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=M~fmM1FR0GpiwS2DTVhuSZ6BTK70dc8PXp~3bARsuHgDpoxfkKJNBMjHo6gdZd-AiCktOMamwqSXSWnmG9tG8QUpC19uCCYa23~cwSwqt-RXr7iaGV37B-jWwBv8sKKLA-MfB5rzBM-xgjL5HxAaKj7rQb7akgfJqufdv7y9fI3hfR3ogE9Ic97H9rQzFsFzNuBWh9M3c1fxEsSJAPL7IMQvXK6EEexDijvCrQX3XFfYk7LJI-MfWXfxzKGU-TRbewmw-svNYtRJOIkSmO7yNx55T8N-zkSVTLAUQRVwGdwenugXUTDmCFQcz5bk4xBWwfLA2HLc5uod93-rqSd0Eg__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Lsws8GZqvYCDKJ7V4EfVfQoteMk-xWwXe438PoQbhUzwGdAVze-IaOM6GSBkVKzxoBRZuWKn~oHK~kFzIn4TDUwRyq95jwt7Qk8bdxCCAmw0wluFQx9yUGtE-tXqMy8XegW31JghD9IgRD~8jh1c-3zPdsqkyFyXo2uxNB5D6bLjU5MvazX3GVp910hosWDPCh0IaPlVbIAOUzeFfjRLg8rPnZN4WctiGKZi6vwiU5BQQM7NTlRyLQfqH1Kwbna0caaI1ABq-sNr6venJ01PhGwKXvF5o-NH~qd9qlt6kMM6HJnIe5fNRYCBBu~-3rxlwk8zejfi1sLJYWXtqv984g__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1738229544&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=l6bvrkC1gK5aM1qHELSN6o3caziSZafqOG3dScnVtEC45tiZXYGPARiwYFqmrp4WJcrruFaTJokx0O3oEluWa7LMJgyQy9sJjwX9QvkzqoNZT6burb8P~qyOFnV6VbLLxfoa-yUnxjGAlbWYcfWg4il3kbzz9q6U6nxXczwj-riMsoT8XZN0p2HDp2Vezk9IGQerJ08ZoAYv65vOWU1KSXB2KNOTXO0bAjCFVBR4LnYyF6MsP0FB5kmDfooC4BK3AsQfIxxcT6BS2GIgEacSUlHOF4Ael65fQ0-kEO3Vrynccl3vkNwg9p05D4yymJSCrI-RKY5Lr2WtwrfV5lQBLA__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes