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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eNI5pIb6wVEFG2agCB1r~CYmg9zZO-FzeNwPsJYCCXfK21Of7jUMpXabwWh2r1~Wcll4gzg6beSiKNnKq1PX4IOY62WW~Lb9uS-SkhSajjClFd2FELAGw~yB8iQMoC1lcf7nztyJSWFDIGfx3Dq0KKFq0nd623ljzSS5-r~08qvqRznl7TE8vmzOOmrKe7qb5aq1BKwg-CrjqgFiNJIgOnU3pDU8aOBFelglHUXiehsgdE8gS4yByE6nTzRijMjALjoUn~VK78kIyFFfEJmS08WVSWJNMHeQMK04Zc4bAmvgL~u14HfpnlwzsyBMkpY1QSIKseoBerKYXo-gtQx27w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=UoNOB2R0VPbpkf2UJLI8bDuke59mcjjC0aXk6MAdoKsIMgon2Ra1WjW1pevpnKIr0au3jwl0C3o1Z3RaAoJI5~1zEsWL07L957XYe1uB6bGwlr50m9QikKNNEm-DwIFHy~kyXMY8j2MeXpjYk7ZrThE-43LMELxHRtpzj0Lgtg2kcIUgyrOV9Izm8VlFn7T-I03C2s6MijpCMxRYWu4mP0rvfaBjwQSxZ-ufoJn8ruYfeQNuKpLWbUNr2ObAUFCC0lVmRfrzo37YcSQjWqXeoU~qdn0bC5sIes9h0KF0xdtTMlZm8S34VJ81AfeL9yFGcLalfBw5fnc6xqpmcst2uw__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=jNe~LXlVOGP~R5u2D~Z~PQVRpYHP3P2tWEuv0jLy5qqXuhCI1~S5z~Prhelv7W1vaH6HoYNkVgfqBUmR8ysNRwMPX42uvN3CRyxEPrRd-DhLj-HG7279UB15zdgIqFwzxqfch8q71d-qMlOcvLSjBtyhQo-mGtyX2ybl3oMT0VlkKfMt592T6JHwI923aFFufBdc3HkXi2gS9Pgp2FuuKhg2aQOAaDF7k4NvLIcMugogy7oJh9I9JPNcLmoXyjQvvh1Ccx8iRC-cifoP88jjRiUHheAhScftuRIPgt1fKMc8GpZh3dFUumy9HYzEYi-JWjkmKBzObPsbmjKi1K8QEw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ka767R6L~3w6CiJHbKKxiDJMOWKd-41jnswelXN0BtNxsvgHTItijqo8aCU9VTkIVkSKa6JjnwHTm3J8X293Gp9KmOeRV7xr11-sSBSpDbCekeENrzNW5k-iVQ0B7LO89CNn13lPfs4M~50~FVW6hFKRq83TLqbHaFuKj78zDCyBardjfdfJ5kcxEdBBzm25tJSfQAi4--Ye6icbXdThHN5NzNzu8aaOkTKy5CioN1SDFO3DAHF43-n5TtthcJ4441Yww15LhWTPPfSDkq2YdggJVtxphKJYgvARhi1dYgEcEN4KGBQPipBuwFYL64K2YUtAla9LAAGup80IGiWqtw__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=hpluzpPYDj9fR~tw7euIpA2F2T~kg7DKliyWry38IFmjExMn1dHxOAhIMfGWBXtcBAmY0hrUzlRI9dZRoGFdOfswvS8JWUahduIJyU~qGO1cLXWpzxhilC7wYPLkp11JWw8KGcbHcE1AdXNmPrl74x-BL6-jmelxXKP9QBd41jKGixdJfgICOXRgRktViVYUyNQJyor2eqaWEvjJksFeahXTt60LWw0UFLCQjMMfIeRPvoEao8nL1BLFc8fUQQh4vHdYxZIy~hDvmSaqCKTLfoxgD3wibWtSv7lJSS9jI4Irzz9MOro3TDY-o0Y5zNSpJ2CY5kuBCIPzwGz-kgWhpQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SHlcmGRVXbujw8gmMOs~hdAi45TVrcDQXZu6jOSHcYx3eR2LxHRXKnC8siGwmQKRmwtHN6ZcnOga7aAA3gG8HiWVYHSacyHVFLaBfCjgTYm5S8mDj074rzxheWuj3WviPkSLD~i8jzNRvTFxmFCdj7ZHRrKqa5UYBHQRuiSygIaa85ce9F2-gKLUnPB3ng6~llMligpzxdkDnQG5cU54XlH-xZCxDtEOvZfkGYFwjUb8WfG-cUKC2Jb6nZQ5g8aXQr6L9tsfBCFaFotyD0cts0egq2pujs~l-EWL8Bb3vtdywqYxQ6uqF7tS-FARPnjgDzHUH2ldxZlqVpdK146a8A__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Zqs2LPBQC0QWBxS07dwXsuhCB2xB2OQD8kusuZJmiF3~wAAwgq3Fi5qvWRm~tas1qhuoPC~Hm5vU2jeYsixg7jP4Kifmg4OM1rGgRIECWn0eVINlS2XyALiSzqxYKOn-gFsGkYEV2JZQn-TyNGBKbaFjFSK58GqL48Uu7Q23q2HjEQlCBeslKDVtGKGDxeY-fyF98PThmbGdvwAxNUGJT2F6jQKrlTXe2iJJnXc3CPQNs190ADD6BpTLVZ~Wh2zf9yBmgo~v9mxfeHJE-J2qEfpBtVosSQgMAeXuOljhVJzyY4uQRajanYE3D4qfqWaOg64DeCloSl4jwziJl-1J9w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1732253160&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=V6VxE6sm1Z0vsMltzXlYy9liOLJCfVU7ZVGL1CvIn-Xb6~Cmmz2Gx6u6vkC6gTOv6iVUneFmMWbMrEIT7tEBcb-QbEa5oyyi6P-T6l88zvYp70JfIim4nVrEsUij~iCZb-D6do412CaUNZjSfnGQjv0SOXnFzABdJ6iBG51sbpUp5aT7BMbN9IwTcb1EQLSMskgTbbVkF--Qy1xzaDiGJYSFk7EntPq4GwMlDIW3SAw5M-P47l7w3mFrEkDSLlN~-sGA64GEqjPCrX9kpyYIZcOGuLhyNGWwlJZX66Wm5Pb~uljEy~DyX~QoW~IcXSPXe3EXT0yLh5msAEXhXVhoiw__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes