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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=fgUEbQ7Xnd6q0P~2pmxdz2g4TUiiyIFyKtqyBHdcjjrkoetRwhlVAYF7c21mIlUed2Sk2LGvnNJwwCDY3Zwupsvvd3wqDIrpo10RSmyvrfqJyDfhdXBVI2Gd080ZDagpDR208BgkgFKDhuhxPSbZPIwPxGBMRqaTyqADWLMH~hH9ZwlcRA4Kl~QVlPaeSwwIFUlL3tCathOlmn2vi41zc7f6G4rkOgLiNO2UOBkFU0hLCC28r3IuzcaRKNPqgN5TsaM5-YlNTwCIsbz2uOOYoWSPJFHv-nV4JSsHLixjp4Uv6l2f66aVnTs9313RtRdA7LyuWp6Fd9uvcDFVlKRBVg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=cS8xlEIn9blDWkvZtKB-hH3YY60t7CSLwStrpUN8Lm0vSquoHc~xlODm55T5WWOCwpEfmkzdfnklzaQwyAoIs43~6H3lo-LMmo9YjoqMpqnwyXeDlN50CdFRC7AsndTwl9oLBjGl5b6VVCX6UP~af5A4UD2cBoBIVoyziCro1eWysEwKWk6XCruLJdoL1ANkjjkzywLfuAP8TO3uW7viTzodzq1slCEW027ovFIlenZ9dK-O0LzVDYuHT9WcsIIQlKwfjTnOY2RxomYXifIYtriKrn7zQ5fLMGB7Il6tTcSEYwMfqDGHS0-e6LqDrZhAQ-rGyqpSF7y4oLibop7e2g__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YGsyQEj8RgZNA8z4MPmUrCeKzoLdUbXxOduy2~ha7dx3-4bFpn0-VIuvNOAVDFytZ3kzcNAxRCQ5-u0HZ~f6ZzBn65m48s5pxV3yaK0RSlbTPleh7lcLbuEJIRpkAjVcq5AOreKeRhdwnUCNMR1NEghL9Ckz1NHuGQA78gBGP6vRX7DaOUTf~ShH6CL8e9STVnTmFG2iHhU3dLSQlThZRJhDY57~Aa3DkqGqMUKOLcAffvktogxEvch8BFkb85T88zvx3QdyI34r2J~RQz6etmPpo1cFp8l1aONxXlCo2LjFypKhBuKnU~yy~rm71w1AubUqgksKPa2uoFrp5GeBFQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LCx0lw~fbGAbQcESlbiDlMYCWaMqoddZGW-PFirmrw2fThLVnMPRgVWOnJPXND9Y~fx-ie2vYCF4KDVpRWTXxYKZ87Ep6UtWQi8wCSxN9v3~F0mwSW5H695Ux6KEhjSG3mTJ9xvyZBQNatInVl3tBMwWYmRO74f7O2iJ0ACnh0BYIADqTP9Lcb8QP2eQ29tlcqirgIfvNw9nJ4DPWyE9ljYBpG3JHJUO1mGABIw6pujsnsk5ZAv9m36ePA8nn9SUtHkPE-dZ6hKWOLbpnyCHqlLWgKNuJMBoSLQJlHngim~TqT4Rc1hWIUWoCnkHa45mLsoalSInQMmTJcWQbNUgRA__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PYAVRV~L6vs7WOnU4wCID-PV2fON3sFLV~M3K4oEaXYQdxPSaEeh~3qAjGNb06Vg9rAMobCJP~nyP4Tv-ktKsyK6N4~HNZEhOKmy9sXwlVAYCyWXCY9M0VkADTGZPEVJOYulDxe0s8FKmBZwQVTpUnYhs1Mk05qnYi313CVvy~L9KnA9Jk-rZUZeHim2gzuJOeq7u5~A6P-K46CfpbUCIFEc~-BuCGhxYL~QBjqqS9Q5D2KkAQKKDt-y75qwfy~2Ee9qCKh4~Gp~DcwARcqcA7LaCO5cvyHr1xHcl9Ux8zz-AbWiKugqrTByk67otREeAzg2LJ7LVGXhqBuH1IADaw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ojHAar1bXRcmT-VgOl24jzQ42ygGlhBW1-Erra3RR0nsUDyX1EQxEvPpzJZxNlJxkPMPUu-5uyuuKSwUNHyazun00zv91pkuo4ffOnbCsjMenb48NvGsHKT6vNuInm8AZcjM6DCgOJAgwxxsQVHzgjjJfQPsua47NNDd5S1ONRuhIKvHjbbfW6R2dnpQMm1z8YFcyvm8eBR1BwYOBAbHg0jsSQ4XhOxOWPTXdvhsYb-V2p-wf9qunJIsf-6tfreU780q2In0mXaUqmBhaMUyWokGg5rq4eYbuNiA1wCwXztJ3ewWtnoy6qWOmhVtjEhT1R8nNy7k2UOdvggK2nG01g__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=VJKOFgrn0T1zFr-4ohaBl8KTpizRnDzkODGD~vyGd0j4ctU8tkm8y21WwNum3I7XEtGqb7BKN1WWlbQcVFKZJjqwbhLtGkPr5UD0XHhi0lVJJQ-biFMeCtfYae5UilpK9c1px3Nq~KGUN5bKnX2SzlOsiILaEQXhGCalSe3Az5VcwyxErbr3rLoVUYsWIBrAcd~dOabXSWJssO7QWqAvB9FtBuRvuASSEdVlmRpchj-h1EPBs1IsZld~tAnkh5VBRSgGD7deWgXnIfEcTNtYM~mzQMjiKmImcxjFOlLvWHR0eghJttJgY6aikvFpsTGNoKYpVC6t4MMNxqPLInf6DA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1745721691&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Yeoh0ex6GH~nC0uBqm1HSpPqUywYd7UlHogCQunGVqeonNu7lyjX-GfW-FxTDDdJ28ytW7dnXhSFpLJ5Y7~lBMBXWJsc8ulxQOPvG~dWTpp7n52PAAHtch5KSP-hMmDsGAHUFJEsJU22tlTFBNS~YJ0GuUZHu6PJ5c2s9Efu3rM-N79y4dPoUa6r3Hi-UI7fCqP-utrYhk~5RKk1J1M3E~Euib-QP7E5OsiiObLT79dm2l5uqYDKCUwF7vb3Y9YVos928FxyECmjlbOClDTHaeM84Hj3bcKO~YlBcLqhi-C~R5lTlD0XkQJXcw52UJkCvWxPBuuacoQ~aKMqqSl8-w__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes