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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1751882043&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=MgJT7PspPsijP5o3KzvT1ofZsBZL9lAS0u1ZkJ2VDhpLgeo3m7kMhBM9Qf9YLFVWsjaM7kbieXdidQGUb~nuhoSD-nqEkRBwnXf19d-beY96~vbHdoJZMDrRxC8jgg~zGqAD~GhW8r0v7ePR96iNNVkOEs~FW96lT9bMDB7GI3BXd4gtJDPPAVdwrPJ6fjgTo~9tnvVX1gHczOmfWajS-0nB4B~ZxXQyk7NJfKdS9-A4reUuqzm1cLLZ3CeuB6puW6zGBfLPnIuGzhnmFRlEJTMQu~zS5KnsckMBaeGirklySQh01WFAndRt2B~TRcJpugTfji0yJOZQMTna8HOT8Q__"
tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1751882043&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=P3MnSrOHjlxne-X2lGgKPXPApYGJlH9k7zlOlbD0Ym2RYYWV3MM~EFgiDtD6yygpdrzr89xnjOT7TOdVJIszgiSpOHhamm-hfTsYWoPELm6EzdQlpbHpwBf9Oa7e6ArDOU4hmBW6PmEM8oZnIPT11pI3vL2Wkq3GqplltvpUmNZfdX8wxuMpHHbD4MitFkuq1s1lpXaFynFsZIflfQ2UoUKSxqxs4ydVEYGUAVBwXEUWdl-GJqlR3BSxlwLM8Ms3dV8HBuD-6uvWeBtUc7behaqg3PBxfU9iBOAIds2gsCC5XfxFFRm83fRinOGKV23IU6l00oFGnRt-BOFJIum~Og__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger