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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1758234246&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=MA029-KDM1u7pppvzfxeffTYhZnINjBx52mL-oVpmujxzgfpP01UDpcB8n9tYa~eMXMMaB9rL39H23iwd9pSrUBIwMTLKdD92JGtXoizkw9XEwSWdzOA2-XgZGBl5F3kYhoC33eCW5~z-iHopy4siUhAmxzAroYAKuqlQ3rHN~xIk8v9ak0v0hCt~2iFBhA2weRVGrq22tPCSPrZJwxYaGnspJGZt22U22F67ptztdDyyxhgv8RE5vWEowBNnWbv8bwkqJE4cX4-i4n59mF5xjO46YPoPg8paoY3VF0uSH~3pNFXKoiZhdBtH6UyculhXq1nt1o4V3CN5esWy61Daw__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1758234246&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=BUD1m0Rekj1vHZN9M5gG3ZqxMlr5MVYv7oX~iHS0iy2xNch0LxzjanEOZkVar14HXq4qdFLsYklr9f1IZpieTAVZu0LmxLXXA2QsbkN9FB5BSADkIxmhBCncZ1ox-YrD1W2gHfH9uP4Nt118zoLvk~WBH8D8SyQCSNyg5aE8KC1Owl2Pb71PFkiG4bWOqn4ECKf3MGwI80WpXWbyO5mLvslbcG-fxl07xXzyodoJLRvPo7S2lWd5-jJjMN7IGTMKXcEa6SQD3iSl8Cc4do98Mb0QkS2lgkgM8QGyuJmCRTW4cwWxCJdBzOeKpA2hmb2Il0FJ6J31pQp9-bnr164syg__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger