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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1757877110&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=dKbCCtJRLAccjC8TEFZk2SH-Ndhj-EGJ3K8Z6cwbmShqWP0QT-~w6Rf8bIyJ2G~snx5Mo04if5qzlIEp1qBZI7ojreAZjY6kOCR-nrHCRV00GWURuC8zyXHmKHfLjjPIJofVP4KfOf1zv6oHMXYAwlVJ9Ysgn7av5aAI~vX-NN2bJ1srLICgCPpQoYcPrjuUIyAUSQfJnGqZ4sC9vk7FYPIyK-M6sW~ikOtO1HRbNRll-CBq~V5-vlPcbFmRDicBe1WG29-VwktHP~y6-ARi8RHCiYraHeItpE3TWcCeRRk5c7sKNyja1yUrrKdJW8KPA-2JIEmXVWLEz-4cQmx5zQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1757877110&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ge6lP8My9iEjGtWPOGVku2L96fpJQzrMYxXxa~7~QoocKACIbJmhrLwH8fQP-0QFBnYjzw30QTNqPHg~MmeGiAA-g423cbYNGZYcMUMj2zipqTKGJs6bhr5KfNB-nvh3J0W2WDsmsjSa5q0q7rCTIQnema4EZPdZi23yDZnal77fZ8g5Ai3E8nTQKVKATJHSr4jKVrKyXPT-BYYunF52i97YhfiHCyW3WY4ffZjXqF1v7F9vrr21u1cPy~zzz698flttR4Y5Y~dnuYPNmxspjxSFsWdbYYDHLvJGVc6idXJh8U3fvyrFR70WdziLx7ml~2TNys084nu~bwLYws1SDg__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger